Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10b13
(767 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative ... 135 3e-32
At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)... 128 4e-30
At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative ... 126 2e-29
At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa ... 125 4e-29
At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa ... 125 4e-29
At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E... 124 5e-29
At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E... 124 5e-29
At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)... 124 9e-29
At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)... 124 9e-29
At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E... 123 1e-28
At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative ... 123 2e-28
At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative ... 123 2e-28
At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative ... 121 6e-28
At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family pro... 120 1e-27
At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative ... 102 2e-22
At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10) id... 99 4e-21
At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative ... 97 2e-20
At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative ... 96 2e-20
At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative ... 96 2e-20
At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative ... 96 3e-20
At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative ... 95 6e-20
At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative ... 95 6e-20
At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E... 93 2e-19
At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E... 92 4e-19
At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)... 90 1e-18
At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E... 90 2e-18
At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E... 89 2e-18
At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E... 89 2e-18
At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)... 89 3e-18
At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)... 85 4e-17
At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E... 84 9e-17
At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E... 83 3e-16
At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative ... 82 5e-16
At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative stron... 80 2e-15
At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E... 79 2e-15
At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)... 78 7e-15
At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E... 75 4e-14
At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative ... 74 9e-14
At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative ... 69 3e-12
At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative ... 57 1e-08
At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)... 55 5e-08
At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)... 55 6e-08
At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)... 54 8e-08
At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)... 54 1e-07
At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family pro... 54 1e-07
At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative ... 49 4e-06
At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative ... 48 5e-06
At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family pro... 46 4e-05
At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family pro... 45 5e-05
At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related si... 44 8e-05
At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family pro... 38 0.010
At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family pro... 35 0.069
At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family pro... 31 0.64
At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family pro... 31 0.85
At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family pro... 31 1.1
At1g71720.1 68414.m08290 S1 RNA-binding domain-containing protei... 31 1.1
At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family pro... 30 1.5
At3g28540.1 68416.m03564 AAA-type ATPase family protein contains... 29 3.4
At4g21770.1 68417.m03150 pseudouridine synthase family protein c... 28 6.0
At5g08420.1 68418.m00992 expressed protein 28 7.9
At3g15400.1 68416.m01954 anther development protein, putative si... 28 7.9
At1g80240.1 68414.m09390 expressed protein contains Pfam profile... 28 7.9
>At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative
strong similar to ubiquitin-conjugating enzymes E2-17
from [Arabidopsis thaliana] SP|P35134, SP|P35132,
SP|P35133; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 149
Score = 135 bits (327), Expect = 3e-32
Identities = 59/147 (40%), Positives = 96/147 (65%), Gaps = 1/147 (0%)
Frame = +1
Query: 217 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 393
A++R+ +EL D+++ + V E +I WQ I+ P + PY+ G F + I+F ++Y
Sbjct: 2 ASKRISRELRDMQRHPPANCSAGPVAEEDIFHWQATIMGPHDSPYSGGVFTVSIDFSSDY 61
Query: 394 PFKPPKISFKTKIYHPNIDEKGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPL 573
PFKPPK++FKTK+YHPNID KG +CL I+ E W PA T +V+ ++ +L+ DP P PL
Sbjct: 62 PFKPPKVNFKTKVYHPNIDSKGSICLDILK-EQWSPAPTTSKVLLSICSLLTDPNPNDPL 120
Query: 574 RAELAEEFLKDRKKFTKNAEEFTKKHS 654
E+A + D+ K+ A+++T+K++
Sbjct: 121 VPEIAHLYKVDKSKYESTAQKWTQKYA 147
>At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)
E2; identical to gi:12643427, SP:P35134
Length = 148
Score = 128 bits (309), Expect = 4e-30
Identities = 59/147 (40%), Positives = 91/147 (61%), Gaps = 1/147 (0%)
Frame = +1
Query: 217 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 393
A++R+ KEL D+++ + V E ++ WQ I+ P PY G F + I+FP +Y
Sbjct: 2 ASKRILKELKDLQKDPPSNCSAGPVAE-DMFHWQATIMGPPESPYAGGVFLVSIHFPPDY 60
Query: 394 PFKPPKISFKTKIYHPNIDEKGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPL 573
PFKPPK+SFKTK+YHPNI+ G +CL I+ E W PA +V+ ++ +L+ DP P+ PL
Sbjct: 61 PFKPPKVSFKTKVYHPNINSNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPL 119
Query: 574 RAELAEEFLKDRKKFTKNAEEFTKKHS 654
E+A + DR K+ A +T+K++
Sbjct: 120 VPEIAHMYKTDRSKYESTARSWTQKYA 146
>At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative
identical or nearly so to Ubiquitin-conjugating enzymes
SP|P35132, SP|P35131, SP|P35133 from {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 126 bits (303), Expect = 2e-29
Identities = 56/147 (38%), Positives = 93/147 (63%), Gaps = 1/147 (0%)
Frame = +1
Query: 217 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 393
A++R+ KEL D+++ S V E ++ WQ I+ P + PY+ G F + I+FP +Y
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60
Query: 394 PFKPPKISFKTKIYHPNIDEKGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPL 573
PFKPPK++F+TK++HPN++ G +CL I+ E W PA +V+ ++ +L+ DP P+ PL
Sbjct: 61 PFKPPKVAFRTKVFHPNVNSNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPL 119
Query: 574 RAELAEEFLKDRKKFTKNAEEFTKKHS 654
E+A + DR K+ A +T+K++
Sbjct: 120 VPEIAHMYKTDRAKYESTARSWTQKYA 146
>At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 178
Score = 125 bits (301), Expect = 4e-29
Identities = 56/147 (38%), Positives = 93/147 (63%), Gaps = 1/147 (0%)
Frame = +1
Query: 217 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 393
A++R+ KEL D+++ S V E ++ WQ I+ P + PY+ G F + I+FP +Y
Sbjct: 32 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 90
Query: 394 PFKPPKISFKTKIYHPNIDEKGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPL 573
PFKPPK++F+TK++HPNI+ G +CL I+ E W PA +V+ ++ +L+ DP P+ PL
Sbjct: 91 PFKPPKVAFRTKVFHPNINSNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPL 149
Query: 574 RAELAEEFLKDRKKFTKNAEEFTKKHS 654
E+A + D+ K+ A +T+K++
Sbjct: 150 VPEIAHMYKTDKNKYESTARTWTQKYA 176
>At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 148
Score = 125 bits (301), Expect = 4e-29
Identities = 56/147 (38%), Positives = 93/147 (63%), Gaps = 1/147 (0%)
Frame = +1
Query: 217 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 393
A++R+ KEL D+++ S V E ++ WQ I+ P + PY+ G F + I+FP +Y
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60
Query: 394 PFKPPKISFKTKIYHPNIDEKGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPL 573
PFKPPK++F+TK++HPNI+ G +CL I+ E W PA +V+ ++ +L+ DP P+ PL
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPL 119
Query: 574 RAELAEEFLKDRKKFTKNAEEFTKKHS 654
E+A + D+ K+ A +T+K++
Sbjct: 120 VPEIAHMYKTDKNKYESTARTWTQKYA 146
>At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 124 bits (300), Expect = 5e-29
Identities = 57/147 (38%), Positives = 92/147 (62%), Gaps = 1/147 (0%)
Frame = +1
Query: 217 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 393
A++R+ KEL D+++ S V E ++ WQ I+ P PY+ G F + I+FP +Y
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60
Query: 394 PFKPPKISFKTKIYHPNIDEKGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPL 573
PFKPPK++F+TK++HPNI+ G +CL I+ E W PA +V+ ++ +L+ DP P+ PL
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPL 119
Query: 574 RAELAEEFLKDRKKFTKNAEEFTKKHS 654
E+A + DR K+ A +T+K++
Sbjct: 120 VPEIAHMYKTDRAKYEATARNWTQKYA 146
>At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 124 bits (300), Expect = 5e-29
Identities = 57/147 (38%), Positives = 92/147 (62%), Gaps = 1/147 (0%)
Frame = +1
Query: 217 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 393
A++R+ KEL D+++ S V E ++ WQ I+ P PY+ G F + I+FP +Y
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60
Query: 394 PFKPPKISFKTKIYHPNIDEKGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPL 573
PFKPPK++F+TK++HPNI+ G +CL I+ E W PA +V+ ++ +L+ DP P+ PL
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPL 119
Query: 574 RAELAEEFLKDRKKFTKNAEEFTKKHS 654
E+A + DR K+ A +T+K++
Sbjct: 120 VPEIAHMYKTDRAKYEATARNWTQKYA 146
>At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 124 bits (298), Expect = 9e-29
Identities = 56/147 (38%), Positives = 91/147 (61%), Gaps = 1/147 (0%)
Frame = +1
Query: 217 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 393
A++R+ KEL D+++ S V E ++ WQ I+ P PY G F + I+FP +Y
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60
Query: 394 PFKPPKISFKTKIYHPNIDEKGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPL 573
PFKPPK++F+TK++HPNI+ G +CL I+ E W PA +V+ ++ +L+ DP P+ PL
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPL 119
Query: 574 RAELAEEFLKDRKKFTKNAEEFTKKHS 654
E+A + D+ K+ A +T+K++
Sbjct: 120 VPEIAHMYKTDKNKYESTARSWTQKYA 146
>At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 124 bits (298), Expect = 9e-29
Identities = 56/147 (38%), Positives = 91/147 (61%), Gaps = 1/147 (0%)
Frame = +1
Query: 217 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 393
A++R+ KEL D+++ S V E ++ WQ I+ P PY G F + I+FP +Y
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60
Query: 394 PFKPPKISFKTKIYHPNIDEKGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPL 573
PFKPPK++F+TK++HPNI+ G +CL I+ E W PA +V+ ++ +L+ DP P+ PL
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPL 119
Query: 574 RAELAEEFLKDRKKFTKNAEEFTKKHS 654
E+A + D+ K+ A +T+K++
Sbjct: 120 VPEIAHMYKTDKNKYESTARSWTQKYA 146
>At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 149
Score = 123 bits (297), Expect = 1e-28
Identities = 55/147 (37%), Positives = 90/147 (61%), Gaps = 1/147 (0%)
Frame = +1
Query: 217 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 393
A++R+ KEL D+++ S ++ WQ I+ P PY+ G F + I+FP +Y
Sbjct: 2 ASKRILKELKDLQKDPPTSCIFAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 61
Query: 394 PFKPPKISFKTKIYHPNIDEKGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPL 573
PFKPPK++F+TK++HPNI+ G +CL I+ E W PA +V+ ++ +L+ DP P+ PL
Sbjct: 62 PFKPPKVAFRTKVFHPNINSNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPL 120
Query: 574 RAELAEEFLKDRKKFTKNAEEFTKKHS 654
E+A + DR K+ A +T+K++
Sbjct: 121 VPEIAHMYKTDRAKYEATARNWTQKYA 147
>At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 123 bits (296), Expect = 2e-28
Identities = 55/147 (37%), Positives = 92/147 (62%), Gaps = 1/147 (0%)
Frame = +1
Query: 217 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 393
A++R+ KEL D+++ S + ++ WQ I+ P + P+ G F + I+FP +Y
Sbjct: 2 ASKRINKELRDLQRDPPVSCSAGPTGD-DMFQWQATIMGPADSPFAGGVFLVTIHFPPDY 60
Query: 394 PFKPPKISFKTKIYHPNIDEKGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPL 573
PFKPPK++F+TK+YHPNI+ G +CL I+ E W PA +V+ ++ +L+ DP P+ PL
Sbjct: 61 PFKPPKVAFRTKVYHPNINSNGSICLDILK-EQWSPALTVSKVLLSICSLLTDPNPDDPL 119
Query: 574 RAELAEEFLKDRKKFTKNAEEFTKKHS 654
E+A + DR K+ A+ +T+K++
Sbjct: 120 VPEIAHIYKTDRVKYESTAQSWTQKYA 146
>At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 123 bits (296), Expect = 2e-28
Identities = 55/147 (37%), Positives = 92/147 (62%), Gaps = 1/147 (0%)
Frame = +1
Query: 217 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 393
A++R+ KEL D+++ S + ++ WQ I+ P + P+ G F + I+FP +Y
Sbjct: 2 ASKRINKELRDLQRDPPVSCSAGPTGD-DMFQWQATIMGPADSPFAGGVFLVTIHFPPDY 60
Query: 394 PFKPPKISFKTKIYHPNIDEKGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPL 573
PFKPPK++F+TK+YHPNI+ G +CL I+ E W PA +V+ ++ +L+ DP P+ PL
Sbjct: 61 PFKPPKVAFRTKVYHPNINSNGSICLDILK-EQWSPALTVSKVLLSICSLLTDPNPDDPL 119
Query: 574 RAELAEEFLKDRKKFTKNAEEFTKKHS 654
E+A + DR K+ A+ +T+K++
Sbjct: 120 VPEIAHIYKTDRVKYESTAQSWTQKYA 146
>At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P35133 Ubiquitin-conjugating
enzyme E2-17 kDa 10 (EC 6.3.2.19) (Ubiquitin- protein
ligase 10) (Ubiquitin carrier protein 10) {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 121 bits (291), Expect = 6e-28
Identities = 55/147 (37%), Positives = 91/147 (61%), Gaps = 1/147 (0%)
Frame = +1
Query: 217 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 393
ATRR+ KEL ++++ S E ++ WQ I+ P+ PY+ G F + I+FP +Y
Sbjct: 2 ATRRILKELKELQRDPPVSCSAGPTGE-DMFHWQATIMGPNESPYSGGVFLVNIHFPPDY 60
Query: 394 PFKPPKISFKTKIYHPNIDEKGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPL 573
PFKPPK+ F+TK++HPNI+ G +CL I+ + W PA +V+ ++ +L+ DP P+ PL
Sbjct: 61 PFKPPKVVFRTKVFHPNINSNGNICLDILK-DQWSPALTISKVLLSICSLLTDPNPDDPL 119
Query: 574 RAELAEEFLKDRKKFTKNAEEFTKKHS 654
E+A + D+ K+ A +T+K++
Sbjct: 120 VPEIAHIYKTDKTKYEAMARSWTQKYA 146
>At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family
protein similar to Ubiquitin-conjugating enzyme E2-16
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) from {Schizosaccharomyces pombe}
SP|P46595, {Caenorhabditis elegans} SP|P35129; contains
Pfam profile PF00179: Ubiquitin-conjugating enzyme
Length = 154
Score = 120 bits (289), Expect = 1e-27
Identities = 52/130 (40%), Positives = 81/130 (62%), Gaps = 1/130 (0%)
Frame = +1
Query: 268 KSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPN 444
+S I + +NI W +I PD PY G F + I FP +YPFKPPK +FKT IYHPN
Sbjct: 24 ESLFSIGQNSNNIYEWTAVIRGPDGTPYEGGMFNLSIKFPTDYPFKPPKFTFKTPIYHPN 83
Query: 445 IDEKGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTK 624
I+++G +C+ I+ + W PA ++V+ +++ L+ P P+ PL E+ + F +R +F +
Sbjct: 84 INDEGSICMNILK-DKWTPALMVEKVLLSILLLLEKPNPDDPLVPEIGQLFKNNRFQFDQ 142
Query: 625 NAEEFTKKHS 654
A EFT +H+
Sbjct: 143 RAREFTARHA 152
>At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin conjugating enzyme
[Lycopersicon esculentum] GI:886679; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 192
Score = 102 bits (245), Expect = 2e-22
Identities = 52/147 (35%), Positives = 83/147 (56%), Gaps = 2/147 (1%)
Frame = +1
Query: 226 RLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFK 402
R+QKEL D ++ S + N+ G I P PY G F+I+I P YPF+
Sbjct: 6 RIQKELQDCERNQDSSGIRVCPKSDNLTRLTGTIPGPIGTPYEGGTFQIDITMPDGYPFE 65
Query: 403 PPKISFKTKIYHPNI-DEKGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPLRA 579
PPK+ F TK++HPNI + G +CL I+ + W PA + ++ AL++ PEP+ P A
Sbjct: 66 PPKMQFSTKVWHPNISSQSGAICLDILK-DQWSPALTLKTALVSIQALLSAPEPKDPQDA 124
Query: 580 ELAEEFLKDRKKFTKNAEEFTKKHSEK 660
+AE+++K+ + F A +T+ ++K
Sbjct: 125 VVAEQYMKNYQVFVSTARYWTETFAKK 151
>At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10)
identical to ubiquitin-conjugating enzyme COP10
[Arabidopsis thaliana] GI:20065779; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 182
Score = 98.7 bits (235), Expect = 4e-21
Identities = 46/120 (38%), Positives = 74/120 (61%), Gaps = 1/120 (0%)
Frame = +1
Query: 301 NILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDEKGQVCLPI 477
N+ W I+ P PY G F ++I FP++YPFKPPK+ FKT+IYH N+D G + + I
Sbjct: 64 NLYHWIATIIGPSGTPYEGGIFFLDIIFPSDYPFKPPKLVFKTRIYHCNVDTAGDLSVNI 123
Query: 478 ISAENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKHSE 657
+ ++W PA +V+QA+ ++ PEP P +A +L DR+K + A+E+T + ++
Sbjct: 124 L-RDSWSPALTITKVLQAIRSIFLKPEPYSPALPVIARLYLTDREKHDEVAKEWTLRFAK 182
>At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 96.7 bits (230), Expect = 2e-20
Identities = 43/121 (35%), Positives = 74/121 (61%), Gaps = 1/121 (0%)
Frame = +1
Query: 295 ESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDEKGQVCL 471
E N+ + +I+ P PY G F++E+ P EYP PK+ F TKIYHPNID+ G++CL
Sbjct: 31 EENMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICL 90
Query: 472 PIISAENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKH 651
I+ + W PA + V+ ++ AL++ P P+ PL +A+ + + + + A+E+T+ +
Sbjct: 91 DILK-DKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVETAKEWTRLY 149
Query: 652 S 654
+
Sbjct: 150 A 150
>At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative
similar to SP|O60015 Ubiquitin-conjugating enzyme E2-21
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) {Pichia angusta}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 157
Score = 96.3 bits (229), Expect = 2e-20
Identities = 52/149 (34%), Positives = 82/149 (55%), Gaps = 5/149 (3%)
Frame = +1
Query: 214 AATRRLQKELNDIRQSGLKSFRDIQV--DESNILTWQGLIV-PDNPPYNKGAFRIEINFP 384
A+ RL KE ++++ + DIQ+ D++NI W LI P PY G F++ + P
Sbjct: 3 ASRARLFKEYKEVQREKVAD-PDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVP 61
Query: 385 AEYPFKPPKISFKTKIYHPNIDEK-GQVCLPIISAENWKPATKTDQVIQALVALVNDPEP 561
YP +PP++ F TKI+HPN+ K G++CL I+ W PA V +A++AL+ PEP
Sbjct: 62 EPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILK-NAWSPAWTLQSVCRAIIALMAHPEP 120
Query: 562 EHPLRAELAEEFLK-DRKKFTKNAEEFTK 645
+ PL + D + F A+ +T+
Sbjct: 121 DSPLNCDSGNLLRSGDVRGFNSMAQMYTR 149
>At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 120
Score = 96.3 bits (229), Expect = 2e-20
Identities = 40/111 (36%), Positives = 69/111 (62%)
Frame = +1
Query: 322 LIVPDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDEKGQVCLPIISAENWKP 501
++ P PY G F++E+ P EYP PK+ F TKIYHPNID+ G++CL I+ + W P
Sbjct: 8 ILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILK-DKWSP 66
Query: 502 ATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKHS 654
A + V+ ++ AL++ P P+ PL +A+ + + + + A+E+T+ ++
Sbjct: 67 ALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVETAKEWTRLYA 117
>At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 95.9 bits (228), Expect = 3e-20
Identities = 43/121 (35%), Positives = 73/121 (60%), Gaps = 1/121 (0%)
Frame = +1
Query: 295 ESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDEKGQVCL 471
E N+ + +I+ P PY G F++E+ P EYP PK+ F TKIYHPNID+ G++CL
Sbjct: 31 EDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICL 90
Query: 472 PIISAENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKH 651
I+ + W PA + V+ ++ AL++ P P+ PL +A+ + + + A+E+T+ +
Sbjct: 91 DILK-DKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVDTAKEWTRLY 149
Query: 652 S 654
+
Sbjct: 150 A 150
>At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative
similar to Ubiquitin-conjugating enzyme E2
(Ubiquitin-protein ligase) (Ubiquitin carrier protein)
from {Xenopus laevis} SP|P51669, {Schizosaccharomyces
pombe} SP|P46595, {Caenorhabditis elegans} SP|P35129;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 409
Score = 94.7 bits (225), Expect = 6e-20
Identities = 40/112 (35%), Positives = 68/112 (60%), Gaps = 3/112 (2%)
Frame = +1
Query: 331 PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDEKGQVCLPIISAE---NWKP 501
P++ Y G F ++I P YPF+PP +SF T IYHPNID G++CL I++ W+P
Sbjct: 54 PEDTVYANGIFNLKIQIPERYPFQPPIVSFATPIYHPNIDNSGRICLDILNLPPKGAWQP 113
Query: 502 ATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKHSE 657
+ V+ ++ L+++P P+ L E++ E+ +R+ F A E T+K+++
Sbjct: 114 SLNISTVLTSMRLLLSEPNPDDGLMCEVSREYKYNRQTFDYKAREMTEKYAK 165
>At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme from [Oryza
sativa] GI:1373001, {Arabidopsis thaliana} SP|P35134,
SP|P35131; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 177
Score = 94.7 bits (225), Expect = 6e-20
Identities = 50/150 (33%), Positives = 84/150 (56%), Gaps = 2/150 (1%)
Frame = +1
Query: 214 AATRRLQKELNDIRQSGLK-SFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPA 387
+A RL KE + + LK R NI W+ + P PY KG F + ++ P
Sbjct: 29 SAENRLWKEFQE-KDDVLKIHVRSWLPSPENIFRWEATVNGPVGCPYEKGVFTVSVHIPP 87
Query: 388 EYPFKPPKISFKTKIYHPNIDEKGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEH 567
+YP++PPKI+FKTKI+HPNI E G++ + I+ + W A + V+ ++ +++++P
Sbjct: 88 KYPYEPPKITFKTKIFHPNISEIGEIFVDILGS-RWSSALTINLVLLSICSILSNPVEPL 146
Query: 568 PLRAELAEEFLKDRKKFTKNAEEFTKKHSE 657
+ A + KDRK + K A E+T K+++
Sbjct: 147 LVSNHAARLYQKDRKAYEKVAREWTLKYAK 176
>At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 145
Score = 92.7 bits (220), Expect = 2e-19
Identities = 43/103 (41%), Positives = 65/103 (63%), Gaps = 1/103 (0%)
Frame = +1
Query: 217 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 393
A++R+ KEL D+++ S V E ++ WQ I+ P PY+ G F + I+FP +Y
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60
Query: 394 PFKPPKISFKTKIYHPNIDEKGQVCLPIISAENWKPATKTDQV 522
PFKPPK++F+TK++HPNI+ G +CL I+ E W PA +V
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILK-EQWSPALTISKV 102
>At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E2;
identical to gi:2689242, SP:P42745
Length = 152
Score = 91.9 bits (218), Expect = 4e-19
Identities = 40/145 (27%), Positives = 77/145 (53%), Gaps = 1/145 (0%)
Frame = +1
Query: 217 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 393
A +RL ++ ++Q D +NI+ W +I PD+ P++ G F++ + F +Y
Sbjct: 5 ARKRLMRDFKRLQQDPPAGISGAPQD-NNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDY 63
Query: 394 PFKPPKISFKTKIYHPNIDEKGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPL 573
P KPP + F ++++HPNI G +CL I+ W P ++ ++ +L+ DP P P
Sbjct: 64 PNKPPTVRFVSRMFHPNIYADGSICLDILQ-NQWSPIYDVAAILTSIQSLLCDPNPNSPA 122
Query: 574 RAELAEEFLKDRKKFTKNAEEFTKK 648
+E A F + ++++ + E ++
Sbjct: 123 NSEAARMFSESKREYNRRVREVVEQ 147
>At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)
E2; UbcAT3; identical to gi:2129757, S46656
Length = 167
Score = 90.2 bits (214), Expect = 1e-18
Identities = 44/160 (27%), Positives = 82/160 (51%), Gaps = 13/160 (8%)
Frame = +1
Query: 217 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 393
A+ LQK+L D+ + + F VDE N+ W I+ P + Y G F ++FP Y
Sbjct: 6 ASLLLQKQLKDLCKKPVDGFSAGLVDEKNVFQWSVSIMGPPDTLYEGGFFNAIMSFPENY 65
Query: 394 PFKPPKISFKTKIYHPNIDEKGQVCLPI------------ISAENWKPATKTDQVIQALV 537
P PP ++F ++++HPN+ G+VC+ I +++E W P + ++ +++
Sbjct: 66 PVSPPTVTFTSEMWHPNVYSDGKVCISILHPPGDDPHGYELASERWTPVHTVESIVLSII 125
Query: 538 ALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKHSE 657
++++ P E P E A+E+ +R +F K ++ E
Sbjct: 126 SMLSGPNDESPANVEAAKEWRDNRAEFRKKVSRCVRRSQE 165
>At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E2;
identical to gi:431261, SP:P42746
Length = 150
Score = 89.8 bits (213), Expect = 2e-18
Identities = 37/119 (31%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Frame = +1
Query: 295 ESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDEKGQVCL 471
++NI+ W LI P++ P++ G F++ ++F +YP KPP + F ++++HPNI G +CL
Sbjct: 30 DNNIMHWNALIFGPEDTPWDGGTFKLTLHFTEDYPNKPPIVRFVSRMFHPNIYADGSICL 89
Query: 472 PIISAENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKK 648
I+ W P V+ ++ +L+ DP P+ P AE A F ++++++ + E ++
Sbjct: 90 DILQ-NQWSPIYDVAAVLTSIQSLLCDPNPDSPANAEAARLFSENKREYNRKVIEIVEQ 147
>At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 89.4 bits (212), Expect = 2e-18
Identities = 38/145 (26%), Positives = 77/145 (53%), Gaps = 1/145 (0%)
Frame = +1
Query: 217 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 393
A +RL ++ ++Q D +NI+ W +I PD+ P++ G F++ + F +Y
Sbjct: 5 ARKRLMRDFKRLQQDPPAGISGAPQD-NNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDY 63
Query: 394 PFKPPKISFKTKIYHPNIDEKGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPL 573
P KPP + F ++++HPNI G +CL I+ W P ++ ++ +L+ DP P P
Sbjct: 64 PNKPPTVRFVSRMFHPNIYADGSICLDILQ-NQWSPIYDVAAILTSIQSLLCDPNPNSPA 122
Query: 574 RAELAEEFLKDRKKFTKNAEEFTKK 648
+E A + + ++++ + + ++
Sbjct: 123 NSEAARMYSESKREYNRRVRDVVEQ 147
>At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 89.4 bits (212), Expect = 2e-18
Identities = 38/145 (26%), Positives = 77/145 (53%), Gaps = 1/145 (0%)
Frame = +1
Query: 217 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 393
A +RL ++ ++Q D +NI+ W +I PD+ P++ G F++ + F +Y
Sbjct: 5 ARKRLMRDFKRLQQDPPAGISGAPQD-NNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDY 63
Query: 394 PFKPPKISFKTKIYHPNIDEKGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPL 573
P KPP + F ++++HPNI G +CL I+ W P ++ ++ +L+ DP P P
Sbjct: 64 PNKPPTVRFVSRMFHPNIYADGSICLDILQ-NQWSPIYDVAAILTSIQSLLCDPNPNSPA 122
Query: 574 RAELAEEFLKDRKKFTKNAEEFTKK 648
+E A + + ++++ + + ++
Sbjct: 123 NSEAARMYSESKREYNRRVRDVVEQ 147
>At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)
E2; identical to gi:992706
Length = 166
Score = 89.0 bits (211), Expect = 3e-18
Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 13/156 (8%)
Frame = +1
Query: 229 LQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKP 405
LQK+L D+ + + F VDE NI W I+ P + Y G F ++FP YP P
Sbjct: 9 LQKQLKDLCKHPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYEGGFFYAIMSFPQNYPNSP 68
Query: 406 PKISFKTKIYHPNIDEKGQVCLPI------------ISAENWKPATKTDQVIQALVALVN 549
P + F + I+HPN+ G+VC+ I +++E W P + ++ +++++++
Sbjct: 69 PTVRFTSDIWHPNVYPDGRVCISILHPPGDDPSGYELASERWTPVHTVESIMLSIISMLS 128
Query: 550 DPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKHSE 657
P E P E A+E+ + R +F K +K E
Sbjct: 129 GPNDESPANVEAAKEWREKRDEFKKKVSRCVRKSQE 164
>At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)
nearly identical to ubiquitin-conjugating enzyme UBC20
[Arabidopsis thaliana] GI:22530867; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 180
Score = 85.4 bits (202), Expect = 4e-17
Identities = 43/150 (28%), Positives = 77/150 (51%), Gaps = 1/150 (0%)
Frame = +1
Query: 208 TMAATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIVPDNPPYNKGA-FRIEINFP 384
+ + +RLQ EL + G +E NI W+G I +G +R+ ++F
Sbjct: 33 SQSVLKRLQSELMGLMMGGGPGISAFP-EEDNIFCWKGTITGSKDTVFEGTEYRLSLSFS 91
Query: 385 AEYPFKPPKISFKTKIYHPNIDEKGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPE 564
+YPFKPPK+ F+T +HPN+D G +CL I+ + W A ++ ++ +L+ +P
Sbjct: 92 NDYPFKPPKVKFETCCFHPNVDVYGNICLDILQ-DKWSSAYDVRTILLSIQSLLGEPNIS 150
Query: 565 HPLRAELAEEFLKDRKKFTKNAEEFTKKHS 654
PL + A + +++++ K E+ K S
Sbjct: 151 SPLNTQ-AAQLWSNQEEYRKMVEKLYKPPS 179
>At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E2;
identical to gi:431269, SP:P42749
Length = 185
Score = 84.2 bits (199), Expect = 9e-17
Identities = 40/113 (35%), Positives = 62/113 (54%), Gaps = 2/113 (1%)
Frame = +1
Query: 331 PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDE-KGQVCLPIISAENWKPAT 507
P + Y G ++I + P YP+K P + F TKIYHPN+DE G VCL +I+ + W P
Sbjct: 39 PKDSIYEGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDEMSGSVCLDVIN-QTWSPMF 97
Query: 508 KTDQVIQA-LVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKHSEKR 663
V + L L+ P P PL E A ++DR + + +E+ +K+++ R
Sbjct: 98 DLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPTYEQRVKEYCEKYAKPR 150
>At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E2;
identical to gi:431265, SP:P42748
Length = 187
Score = 82.6 bits (195), Expect = 3e-16
Identities = 39/111 (35%), Positives = 61/111 (54%), Gaps = 2/111 (1%)
Frame = +1
Query: 331 PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDE-KGQVCLPIISAENWKPAT 507
P + Y G ++I + P YP+K P + F TKIYHPN+DE G VCL +I+ + W P
Sbjct: 39 PKDSLYQGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDELSGSVCLDVIN-QTWSPMF 97
Query: 508 KTDQVIQA-LVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKHSE 657
V + L L+ P P PL E A ++DR + + +E+ +K+++
Sbjct: 98 DLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPAYEQRVKEYCEKYAK 148
>At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative
similar to SP|Q16763 Ubiquitin-conjugating enzyme E2-24
kDa (EC 6.3.2.19) (Ubiquitin- protein ligase) (Ubiquitin
carrier protein) {Homo sapiens}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 251
Score = 81.8 bits (193), Expect = 5e-16
Identities = 39/148 (26%), Positives = 76/148 (51%)
Frame = +1
Query: 223 RRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIVPDNPPYNKGAFRIEINFPAEYPFK 402
++L KEL + +S + + DE + P PY G FR+++ ++P
Sbjct: 13 KQLAKELKSLDESPPDGIKVVVNDEDFSQICADIEGPVGTPYENGLFRMKLALSHDFPHS 72
Query: 403 PPKISFKTKIYHPNIDEKGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPLRAE 582
PPK F TKI+HPN+ G++C+ + ++W P+ V+ + L+ +P PE L +
Sbjct: 73 PPKGYFMTKIFHPNVASNGEICVNTLK-KDWNPSLGLRHVLSVVRCLLIEPFPESALNEQ 131
Query: 583 LAEEFLKDRKKFTKNAEEFTKKHSEKRP 666
+ L++ ++ ++A +T H++ +P
Sbjct: 132 AGKMLLENYDEYARHARLYTGIHAKPKP 159
>At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative strong
similarity to gi:6635457 RUB1 conjugating enzyme
[Arabidopsis thaliana]; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 185
Score = 79.8 bits (188), Expect = 2e-15
Identities = 47/139 (33%), Positives = 69/139 (49%), Gaps = 1/139 (0%)
Frame = +1
Query: 214 AATRRLQKELNDIRQSGLKSFR-DIQVDESNILTWQGLIVPDNPPYNKGAFRIEINFPAE 390
A RL K+++++ KS + +++++ ++ I PD Y G F
Sbjct: 31 AGELRLHKDISELNLP--KSCKISFPNGKNDLMNFEVTIKPDEGYYLSGNFVFSFQVSNM 88
Query: 391 YPFKPPKISFKTKIYHPNIDEKGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHP 570
YP + PK+ KTK+YHPNID +G VCL I+ E+WKP + VI L L +P E P
Sbjct: 89 YPHEAPKVKCKTKVYHPNIDLEGNVCLNIL-REDWKPVLNINTVIYGLFHLFTEPNYEDP 147
Query: 571 LRAELAEEFLKDRKKFTKN 627
L E A + K F N
Sbjct: 148 LNHEAAAVLRDNPKTFEYN 166
>At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E2;
identical to gi|431267, SP:P42750, PIR:S52661; contains
a ubiquitin-conjugating enzymes active site (PDOC00163)
Length = 183
Score = 79.4 bits (187), Expect = 2e-15
Identities = 37/111 (33%), Positives = 60/111 (54%), Gaps = 2/111 (1%)
Frame = +1
Query: 331 PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDE-KGQVCLPIISAENWKPAT 507
P + Y G ++I++ P YP+K P + F KIYHPN+DE G VCL +I+ + W P
Sbjct: 39 PTDSLYQGGVWKIKVELPEAYPYKSPSVGFVNKIYHPNVDESSGAVCLDVIN-QTWSPMF 97
Query: 508 KTDQVIQA-LVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKHSE 657
V ++ L L+ P P P E A ++DR + +E+ +K+++
Sbjct: 98 DLINVFESFLPQLLLYPNPSDPFNGEAASLLMRDRAAYELKVKEYCEKYAK 148
>At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)
nearly identical to ubiquitin-conjugating enzyme UBC19
[Arabidopsis thaliana] GI:22530865; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 181
Score = 77.8 bits (183), Expect = 7e-15
Identities = 42/145 (28%), Positives = 75/145 (51%), Gaps = 4/145 (2%)
Frame = +1
Query: 223 RRLQKELNDIRQS---GLKSFRDIQVDESNILTWQGLIVPDNPPYNKGA-FRIEINFPAE 390
+RLQ EL + G+ +F + E NI W+G I +G +R+ + F +
Sbjct: 39 KRLQSELMGLMMGADPGISAFPE----EDNIFCWKGTITGSKDTVFEGTEYRLSLTFSND 94
Query: 391 YPFKPPKISFKTKIYHPNIDEKGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHP 570
YPFK PK+ F+T +HPN+D G +CL I+ + W A ++ ++ +L+ +P P
Sbjct: 95 YPFKSPKVKFETCCFHPNVDLYGNICLDILQ-DKWSSAYDVRTILLSIQSLLGEPNISSP 153
Query: 571 LRAELAEEFLKDRKKFTKNAEEFTK 645
L + A + +++++ K E+ K
Sbjct: 154 LNNQ-AAQLWSNQEEYRKMVEKLYK 177
>At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E2;
identical to gi:992703, SP:P42747
Length = 198
Score = 75.4 bits (177), Expect = 4e-14
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 13/144 (9%)
Frame = +1
Query: 265 LKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHP 441
L +++ D NI W I+ P + Y G F + FP YP PP + F + ++HP
Sbjct: 53 LSPYQNQSCDCYNIFEWSVTIIGPPDTLYEGGFFNAIMTFPQNYPNSPPTVRFTSDMWHP 112
Query: 442 NIDEKGQVCLPI------------ISAENWKPATKTDQVIQALVALVNDPEPEHPLRAEL 585
N+ G+VC+ I +++E W P + ++ +++++++ P E P E
Sbjct: 113 NVYSDGRVCISILHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGPNDESPANVEA 172
Query: 586 AEEFLKDRKKFTKNAEEFTKKHSE 657
A+E+ R +F K +K E
Sbjct: 173 AKEWRDKRDEFKKKVSRCVRKSQE 196
>At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 112
Score = 74.1 bits (174), Expect = 9e-14
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Frame = +1
Query: 295 ESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDEKGQVCL 471
E N+ + +I+ P PY G F++E+ P EYP PK+ F TKIYHPNID+ G++CL
Sbjct: 31 EDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICL 90
Query: 472 PIISAENWKPATKTDQVI 525
I+ + W PA + V+
Sbjct: 91 DILK-DKWSPALQIRTVL 107
>At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P50550 Ubiquitin-like protein
SUMO-1 conjugating enzyme (EC 6.3.2.19) (SUMO- 1-protein
ligase) (Ubiquitin carrier protein)
(Ubiquitin-conjugating enzyme UbcE2A) {Xenopus laevis};
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 160
Score = 69.3 bits (162), Expect = 3e-12
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Frame = +1
Query: 301 NILTWQGLIVPD-NPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDEKGQVCLPI 477
N++ W I + G F + ++F +YP KPPK F +HPN+ G VCL I
Sbjct: 38 NLMVWHCTIPGKAGTDWEGGFFPLTMHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSI 97
Query: 478 ISAE-NWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKH 651
++ + W+PA Q++ + L++ P P P + + F +D ++ K + +K++
Sbjct: 98 LNEDYGWRPAITVKQILVGIQDLLDTPNPADPAQTDGYHLFCQDPVEYKKRVKLQSKQY 156
>At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative
similar to Non-Canonical UBiquitin Conjugating Enzyme 1
(NCUBE1) from [Gallus gallus] GI:7362937, [Mus musculus]
GI:7363050, [Homo sapiens] GI:7362973; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 309
Score = 56.8 bits (131), Expect = 1e-08
Identities = 49/175 (28%), Positives = 84/175 (48%), Gaps = 7/175 (4%)
Frame = +1
Query: 217 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 393
A +R+ +E+ +++ + F + ++E NI WQ I P + + G + I PA+Y
Sbjct: 12 AVKRILQEVKEMQANPSDDFMSLPLEE-NIFEWQFAIRGPGDTEFEGGIYHGRIQLPADY 70
Query: 394 PFKPPKISFKTKIYHPNIDEKGQVCLPIIS--AENWKPATKTDQVIQALVALVNDPEPEH 567
PFKPP SF + + ++CL I + E+W+P+ + AL+A + P
Sbjct: 71 PFKPP--SFMLLTPNGRFETNTKICLSISNYHPEHWQPSWSVRTALVALIAFM----PTS 124
Query: 568 PLRAELAEEFLKDRKK--FTKNAEEFTKKHSEKRP--TD*IHYKNFKFRFTAVPK 720
P A + ++ KD ++ K+ E K S +R D IH + + T VPK
Sbjct: 125 PNGALGSVDYPKDERRTLAIKSRETPPKYGSPERQKIIDEIH-QYILSKATVVPK 178
>At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)
E2; identical to ubiquitin-conjugating enzyme 15
GI:2801442 from [Arabidopsis thaliana]
Length = 161
Score = 55.2 bits (127), Expect = 5e-08
Identities = 38/128 (29%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
Frame = +1
Query: 199 KFCTMAATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIVPDNPP--YNKGAFRIE 372
K + A RLQKEL++ + + FR D N+ W + V P Y ++++
Sbjct: 10 KALSKIACNRLQKELSEWQLNPPTGFRHKVTD--NLQKWT-IDVTGAPGTLYANETYQLQ 66
Query: 373 INFPAEYPFKPPKISFKTKI-YHPNIDEKGQVCLPIISAENWKPATKTDQV-IQALVALV 546
+ FP YP + P++ F + HP+I G +CL I+ ++W PA + V I L L
Sbjct: 67 VEFPEHYPMEAPQVVFVSPAPSHPHIYSNGHICLDIL-YDSWSPAMTVNSVCISILSMLS 125
Query: 547 NDPEPEHP 570
+ P + P
Sbjct: 126 SSPAKQRP 133
>At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)
E2; identical to gi:2801448
Length = 161
Score = 54.8 bits (126), Expect = 6e-08
Identities = 38/128 (29%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
Frame = +1
Query: 199 KFCTMAATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIVPDNPP--YNKGAFRIE 372
K + A RLQKEL++ + + F+ D N+ W + V P Y + ++
Sbjct: 10 KALSKIACNRLQKELSEWQVNPPTGFKHRVTD--NLQKWV-IEVTGAPGTLYANETYNLQ 66
Query: 373 INFPAEYPFKPPKISFKTKI-YHPNIDEKGQVCLPIISAENWKPATKTDQV-IQALVALV 546
+ FP YP + P++ F HP+I G +CL I+ ++W PA V I L L
Sbjct: 67 VEFPQHYPMEAPQVIFVPPAPLHPHIYSNGHICLDIL-YDSWSPAMTVSSVCISILSMLS 125
Query: 547 NDPEPEHP 570
+ PE + P
Sbjct: 126 SSPEKQRP 133
>At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)
E2; identical to gi:2801444, GB:AAC39325 from
[Arabidopsis thaliana] (Plant Mol. Biol. 23 (2), 387-396
(1993))
Length = 161
Score = 54.4 bits (125), Expect = 8e-08
Identities = 36/127 (28%), Positives = 60/127 (47%), Gaps = 3/127 (2%)
Frame = +1
Query: 199 KFCTMAATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQ-GLIVPDNPPYNKGAFRIEI 375
K + AT RLQKEL + + + F+ D N+ W +I Y +++++
Sbjct: 10 KTLSKIATNRLQKELVEWQMNPPTGFKHKVTD--NLQRWIIEVIGAPGTLYANDTYQLQV 67
Query: 376 NFPAEYPFKPPKISF-KTKIYHPNIDEKGQVCLPIISAENWKPATKTDQV-IQALVALVN 549
+FP YP + P++ F HP+I G +CL I+ ++W PA + I L L +
Sbjct: 68 DFPEHYPMESPQVIFLHPAPLHPHIYSNGHICLDIL-YDSWSPAMTVSSICISILSMLSS 126
Query: 550 DPEPEHP 570
E + P
Sbjct: 127 STEKQRP 133
>At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)
E2; identical to gi:2801446
Length = 161
Score = 54.0 bits (124), Expect = 1e-07
Identities = 37/158 (23%), Positives = 75/158 (47%), Gaps = 4/158 (2%)
Frame = +1
Query: 199 KFCTMAATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIVPDNPP---YNKGAFRI 369
K T AT RLQKE + + + F+ D N+ W +I P Y +++
Sbjct: 10 KGLTKIATNRLQKEFMEWQTNPPSGFKHRVSD--NLQRW--IIEVHGVPGTLYANETYQL 65
Query: 370 EINFPAEYPFKPPKISFKTKI-YHPNIDEKGQVCLPIISAENWKPATKTDQVIQALVALV 546
++ FP YP + P++ F+ HP+I G +CL ++ ++W PA + + ++++++
Sbjct: 66 QVEFPEHYPMEAPQVIFQHPAPLHPHIYSNGHICLDVL-YDSWSPAMRLSSICLSILSML 124
Query: 547 NDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKHSEK 660
+ + + + + +LK+ K E + H +K
Sbjct: 125 SSSSVKQ--KPKDNDHYLKNCKHGRSPKETRWRFHDDK 160
>At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family protein
similar to ubiquitin-conjugating enzyme GB:3319990 from
[Mus musculus]; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 1163
Score = 53.6 bits (123), Expect = 1e-07
Identities = 50/172 (29%), Positives = 78/172 (45%), Gaps = 24/172 (13%)
Frame = +1
Query: 229 LQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKP 405
+QKE I L ++ ES I + +I+ + PY+ G F +I FP YP P
Sbjct: 610 IQKEWK-ILDKNLPETIFVRACESRIDLLRAVIIGAEGTPYHDGLFFFDIQFPDTYPSVP 668
Query: 406 PKISFKT--KIYHPNIDEKGQVCLPIISA------ENWKPATKTD-QVIQALVALV---- 546
PK+ + + +PN+ + G+VCL +IS E W P T Q++ ++ AL+
Sbjct: 669 PKVHYHSGGLRINPNLYKCGKVCLSLISTWTGKKREKWLPKESTMLQLLVSIQALILNEK 728
Query: 547 ---NDPEPEHPLRAELAEEFLKDRKK-------FTKNAEEFTKKHSEKRPTD 672
N+P E + L E + KD + T + EEF + H R D
Sbjct: 729 PYYNEPGYEKSMGTPLGESYSKDYSENVFVFSLKTMHFEEFVRSHFFVRSHD 780
Score = 44.4 bits (100), Expect = 8e-05
Identities = 30/114 (26%), Positives = 57/114 (50%), Gaps = 10/114 (8%)
Frame = +1
Query: 250 IRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKT 426
I ++ L ++ ES + + +I+ + PY+ G F +I FP YP PP + + +
Sbjct: 282 ILENDLPEAISVRACESRMDLLRAVIIGAEGTPYHDGLFFFDIQFPDTYPSVPPNVHYHS 341
Query: 427 --KIYHPNIDEKGQVCLPII------SAENWKPATKTD-QVIQALVALVNDPEP 561
+PN+ G+VCL ++ + E W P T Q++ ++ AL+ + +P
Sbjct: 342 GGLRINPNLYNCGKVCLSLLGTWAGSAREKWLPNESTMLQLLVSIQALILNEKP 395
Score = 34.3 bits (75), Expect = 0.091
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Frame = +1
Query: 187 GHFSKFCTMAATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAF 363
G SK + +++Q E + Q+ L ++ ES + + +I+ + PY+ G F
Sbjct: 908 GKASKQHSKNWVKKVQDEWKILNQN-LPETIFVRACESRMDLLRAVIIGAEGTPYHDGLF 966
Query: 364 RIEINFPAEYPFKPPKISFKT--KIYHPNIDEKGQVCLPI 477
+I FP YP PP + + + +PN+ G+V + I
Sbjct: 967 FFDIQFPDTYPSVPPNVYYHSGGLRINPNLYNCGKVLVSI 1006
>At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 237
Score = 48.8 bits (111), Expect = 4e-06
Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 3/119 (2%)
Frame = +1
Query: 214 AATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAE 390
A +RLQKE + + + S + ++IL W ++ + P+ G + +I FP E
Sbjct: 5 ACIKRLQKEYRALCKEPV-SHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPE 63
Query: 391 YPFKPPKISFKTKIYHPNIDEKGQVCLPI--ISAENWKPATKTDQVIQALVALVNDPEP 561
YP+KPP I+ T + + ++CL + E+W P ++ L++ + D P
Sbjct: 64 YPYKPPGITMTTP--NGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSP 120
>At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 243
Score = 48.4 bits (110), Expect = 5e-06
Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 3/119 (2%)
Frame = +1
Query: 214 AATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAE 390
A +RLQKE + + + S + ++IL W ++ + P+ G + +I FP E
Sbjct: 5 ACIKRLQKEYRALCKEPV-SHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPE 63
Query: 391 YPFKPPKISFKTKIYHPNIDEKGQVCLPI--ISAENWKPATKTDQVIQALVALVNDPEP 561
YP+KPP I+ T + + ++CL + E+W P ++ L++ + D P
Sbjct: 64 YPYKPPGITMTTP--NGRFVTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSP 120
>At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family protein
low similarity to ubiquitin-conjugating BIR-domain enzyme
APOLLON [Homo sapiens] GI:8489831, ubiquitin-conjugating
enzyme [Mus musculus] GI:3319990; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 907
Score = 45.6 bits (103), Expect = 4e-05
Identities = 32/128 (25%), Positives = 67/128 (52%), Gaps = 10/128 (7%)
Frame = +1
Query: 208 TMAATRRLQKELNDIRQSGLKSFRDIQVDESNI-LTWQGLIVPDNPPYNKGAFRIEINFP 384
T + +++Q+E +++ ++ L + ++V E + L L+ PY+ G F +I P
Sbjct: 660 TKSWVKKVQQEWSNL-EANLPNTIYVRVCEERMDLLRAALVGAPGTPYHDGLFFFDIMLP 718
Query: 385 AEYPFKPPKISFKT--KIYHPNIDEKGQVCLPIIS------AENWKPATKTD-QVIQALV 537
+YP +PP + + + +PN+ E G+VCL +++ E W + + Q++ +
Sbjct: 719 PQYPHEPPMVHYHSGGMRLNPNLYESGRVCLSLLNTWSGSGTEVWNAGSSSILQLLLSFQ 778
Query: 538 ALVNDPEP 561
ALV + +P
Sbjct: 779 ALVLNEKP 786
>At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family protein
low similarity to ubiquitin-conjugating BIR-domain enzyme
APOLLON [Homo sapiens] GI:8489831, ubiquitin-conjugating
enzyme [Mus musculus] GI:3319990; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1102
Score = 45.2 bits (102), Expect = 5e-05
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Frame = +1
Query: 343 PYNKGAFRIEINFPAEYPFKPPKISFKTKIY--HPNIDEKGQVCLPIISA------ENWK 498
PY G F + + P++YP PP + + + +PN+ E+G+VCL +++ E W
Sbjct: 893 PYQDGLFFFDFHLPSDYPSVPPSAYYHSGGWRLNPNLYEEGKVCLSLLNTWTGRGNEVWD 952
Query: 499 PATKTDQVIQALVAL 543
P K+ ++Q LV+L
Sbjct: 953 P--KSSSILQVLVSL 965
>At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related
similar to ubiquitin-conjugating enzyme (GI:3319990)
[Mus musculus]; similar to Baculoviral IAP
repeat-containing protein 6 (Ubiquitin-conjugating
BIR-domain enzyme apollon) (Swiss-Prot:Q9NR09) [Homo
sapiens];
Length = 609
Score = 44.4 bits (100), Expect = 8e-05
Identities = 34/123 (27%), Positives = 59/123 (47%), Gaps = 10/123 (8%)
Frame = +1
Query: 223 RRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPF 399
+R+Q E I + L ++ ES + + +I+ PY+ G F +I FP YP
Sbjct: 335 KRIQDEWR-ILEKDLPEMIFVRAYESRMDLLRAVIIGAQGTPYHDGLFFFDIFFPDTYPS 393
Query: 400 KPPKISFKT--KIYHPNIDEKGQVCLPIISA------ENWKPATKTD-QVIQALVALVND 552
PP + + + +PN+ G+VCL ++ E W P T T QV+ ++ L+ +
Sbjct: 394 TPPIVHYHSGGLRINPNLYNCGKVCLSLLGTWSGNQREKWIPNTSTMLQVLVSIQGLILN 453
Query: 553 PEP 561
+P
Sbjct: 454 QKP 456
>At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 158
Score = 37.5 bits (83), Expect = 0.010
Identities = 23/94 (24%), Positives = 43/94 (45%), Gaps = 3/94 (3%)
Frame = +1
Query: 262 GLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYH 438
G S+ D+ + +W G I+ P N Y F++++ EYP PP + F+T+I
Sbjct: 30 GTVSYGMDDADDIYMQSWTGTILGPPNTAYEGKIFQLKLFCGKEYPESPPTVRFQTRINM 89
Query: 439 PNIDEKGQVCLPII--SAENWKPATKTDQVIQAL 534
++ + V P + NW+ + ++ L
Sbjct: 90 ACVNPETGVVEPSLFPMLTNWRREYTMEDILVKL 123
>At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 159
Score = 34.7 bits (76), Expect = 0.069
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 4/93 (4%)
Frame = +1
Query: 262 GLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYH 438
G S+ D+ + +W G I+ P N Y F++++ +YP PP + F+++I
Sbjct: 30 GTVSYGMDDADDILMQSWTGTILGPHNTAYEGKIFQLKLFCGKDYPESPPTVRFQSRINM 89
Query: 439 PNIDEKGQVCLP--IISAENW-KPATKTDQVIQ 528
++ + V P NW + T D +IQ
Sbjct: 90 ACVNPENGVVDPSHFPMLSNWRREFTMEDLLIQ 122
>At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 145
Score = 31.5 bits (68), Expect = 0.64
Identities = 13/48 (27%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 292 DESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKI 432
D+ + +W G I+ P N + +++++ +YP KPP + F ++I
Sbjct: 41 DDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRI 88
>At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 31.1 bits (67), Expect = 0.85
Identities = 12/48 (25%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 292 DESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKI 432
D+ + +W G I+ P N + +++++ +YP KPP + F +++
Sbjct: 42 DDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRV 89
>At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Frame = +1
Query: 292 DESNILTWQGLIV-PDNPPYNKGA-FRIEINFPAEYPFKPPKISFKTKI 432
D+ + +W G I+ P N ++G +++++ +YP KPP + F ++I
Sbjct: 41 DDIYMRSWTGTIIGPHNVTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRI 89
>At1g71720.1 68414.m08290 S1 RNA-binding domain-containing protein
contains Pfam domain, PF00575: S1 RNA binding domain
Length = 487
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = +1
Query: 508 KTDQVIQALVALVNDPEPEHPLRAELAEE---FLKDRKKFTKNAEEFTKKHSEKRP 666
+ D+ ++ LV P+ A+L E F+ DR+K AEE KK+ EK P
Sbjct: 395 QVDESVKVLVVKSLFPDKISLSIADLESEPGLFISDREKVFTEAEEMAKKYREKMP 450
>At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 147
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/49 (26%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Frame = +1
Query: 292 DESNILTWQGLIV-PDNPPYNKGA-FRIEINFPAEYPFKPPKISFKTKI 432
D+ + +W G I+ P N ++G +++++ +YP KPP + F +++
Sbjct: 42 DDIYMRSWTGTIIGPHNVTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRV 90
>At3g28540.1 68416.m03564 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 510
Score = 29.1 bits (62), Expect = 3.4
Identities = 21/63 (33%), Positives = 27/63 (42%)
Frame = +1
Query: 472 PIISAENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKH 651
P AEN P + D L LV E E +LAEE + KK ++A KK
Sbjct: 429 PADVAENLMPKSDEDDADICLTRLVKSLEEEKEKAKKLAEE--EKMKKAARDARRIKKKA 486
Query: 652 SEK 660
E+
Sbjct: 487 EEE 489
>At4g21770.1 68417.m03150 pseudouridine synthase family protein
contains Pfam profile PF00849: RNA pseudouridylate
synthase
Length = 472
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/37 (43%), Positives = 25/37 (67%), Gaps = 3/37 (8%)
Frame = +2
Query: 353 KVLSALRLT---FQQNTHSNPRKLVSKQRFTTLTLMK 454
+ L++ R+T F+ N HS PR + S +RFT L+L+K
Sbjct: 21 RTLASTRVTTPLFRSNKHS-PRFISSPKRFTCLSLLK 56
>At5g08420.1 68418.m00992 expressed protein
Length = 391
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
Frame = +1
Query: 553 PEPEHP----LRAELAEEFLKDRKKFTKNAEEFTKKHSEK 660
P P+ P ++ E E F+ D+KK K +E +K SEK
Sbjct: 268 PPPQPPSKIDMQLESGEYFMSDKKKSEKKWQEKQEKQSEK 307
>At3g15400.1 68416.m01954 anther development protein, putative
similar to anther development protein ATA20 GB:AAC50042
GI:2708813 from [Arabidopsis thaliana]
Length = 416
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +1
Query: 436 HPNIDEKGQVCLPIISAENWKPA--TKTDQVIQALVALVNDPEPEH 567
HP EK L +S E+ P K DQ++Q + + + + +P+H
Sbjct: 153 HPEHKEKPDHKLQSMSGESKHPEHKVKPDQIMQTMASELEEEDPDH 198
>At1g80240.1 68414.m09390 expressed protein contains Pfam profile
PF04862: Protein of unknown function, DUF642
Length = 370
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +1
Query: 316 QGLIVPDNPPYNKGAFRI-EINFPAEYPFKPPKISFKTKIYHPNIDEKGQVCLPII 480
QG ++ D KG FR + F A +++F + YH D G +C P+I
Sbjct: 304 QGKVMVDYASKGKGGFRRGRLVFKAVSA--RTRVTFLSTFYHMKSDHSGSLCGPVI 357
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,172,612
Number of Sequences: 28952
Number of extensions: 344735
Number of successful extensions: 1009
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 972
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1721869952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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