Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10b11
(301 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z99277-1|CAB16485.1| 491|Caenorhabditis elegans Hypothetical pr... 26 5.8
Z81031-8|CAJ55248.1| 363|Caenorhabditis elegans Hypothetical pr... 26 5.8
Z69903-8|CAD56585.3| 363|Caenorhabditis elegans Hypothetical pr... 26 5.8
Z69903-5|CAH60762.2| 497|Caenorhabditis elegans Hypothetical pr... 26 5.8
Z69903-4|CAA93775.3| 479|Caenorhabditis elegans Hypothetical pr... 26 5.8
Z69903-3|CAI79241.1| 480|Caenorhabditis elegans Hypothetical pr... 26 5.8
AY836558-1|AAW21316.1| 479|Caenorhabditis elegans casein kinase... 26 5.8
AY836557-1|AAW21315.1| 297|Caenorhabditis elegans casein kinase... 26 5.8
AY836556-1|AAW21314.1| 479|Caenorhabditis elegans casein kinase... 26 5.8
AL032656-4|CAB60309.2| 407|Caenorhabditis elegans Hypothetical ... 25 7.6
AF016684-5|AAB66207.2| 297|Caenorhabditis elegans Hypothetical ... 25 7.6
>Z99277-1|CAB16485.1| 491|Caenorhabditis elegans Hypothetical
protein Y53C12A.2 protein.
Length = 491
Score = 25.8 bits (54), Expect = 5.8
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +1
Query: 103 ILQQSDKQRKIKY-GQSHICSNGSSHPLLHTET*IQEMNYKQNLLACFCKGLL 258
I++ + Q + Y Q+H SNG++H +LHT + MN ++ C GL+
Sbjct: 156 IMRATFSQVQTNYINQTH--SNGATHEVLHTGY-VDGMNVLGIIVFCIVMGLV 205
>Z81031-8|CAJ55248.1| 363|Caenorhabditis elegans Hypothetical
protein F46F2.2b protein.
Length = 363
Score = 25.8 bits (54), Expect = 5.8
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +2
Query: 74 DESQLKGLAKYFNSQTNRGRLNTARATYAVMGAVILYF 187
+ L G A+Y + T+RG + R +G V +YF
Sbjct: 234 ENKNLTGTARYASINTHRGIEQSRRDDIESLGYVFMYF 271
>Z69903-8|CAD56585.3| 363|Caenorhabditis elegans Hypothetical
protein F46F2.2b protein.
Length = 363
Score = 25.8 bits (54), Expect = 5.8
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +2
Query: 74 DESQLKGLAKYFNSQTNRGRLNTARATYAVMGAVILYF 187
+ L G A+Y + T+RG + R +G V +YF
Sbjct: 234 ENKNLTGTARYASINTHRGIEQSRRDDIESLGYVFMYF 271
>Z69903-5|CAH60762.2| 497|Caenorhabditis elegans Hypothetical
protein F46F2.2c protein.
Length = 497
Score = 25.8 bits (54), Expect = 5.8
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +2
Query: 74 DESQLKGLAKYFNSQTNRGRLNTARATYAVMGAVILYF 187
+ L G A+Y + T+RG + R +G V +YF
Sbjct: 350 ENKNLTGTARYASINTHRGIEQSRRDDIESLGYVFMYF 387
>Z69903-4|CAA93775.3| 479|Caenorhabditis elegans Hypothetical
protein F46F2.2a protein.
Length = 479
Score = 25.8 bits (54), Expect = 5.8
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +2
Query: 74 DESQLKGLAKYFNSQTNRGRLNTARATYAVMGAVILYF 187
+ L G A+Y + T+RG + R +G V +YF
Sbjct: 350 ENKNLTGTARYASINTHRGIEQSRRDDIESLGYVFMYF 387
>Z69903-3|CAI79241.1| 480|Caenorhabditis elegans Hypothetical
protein F46F2.2d protein.
Length = 480
Score = 25.8 bits (54), Expect = 5.8
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +2
Query: 74 DESQLKGLAKYFNSQTNRGRLNTARATYAVMGAVILYF 187
+ L G A+Y + T+RG + R +G V +YF
Sbjct: 350 ENKNLTGTARYASINTHRGIEQSRRDDIESLGYVFMYF 387
>AY836558-1|AAW21316.1| 479|Caenorhabditis elegans casein kinase I
epsilon/delta kin-20C protein.
Length = 479
Score = 25.8 bits (54), Expect = 5.8
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +2
Query: 74 DESQLKGLAKYFNSQTNRGRLNTARATYAVMGAVILYF 187
+ L G A+Y + T+RG + R +G V +YF
Sbjct: 350 ENKNLTGTARYASINTHRGIEQSRRDDIESLGYVFMYF 387
>AY836557-1|AAW21315.1| 297|Caenorhabditis elegans casein kinase I
epsilon/delta kin-20B protein.
Length = 297
Score = 25.8 bits (54), Expect = 5.8
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +2
Query: 74 DESQLKGLAKYFNSQTNRGRLNTARATYAVMGAVILYF 187
+ L G A+Y + T+RG + R +G V +YF
Sbjct: 168 ENKNLTGTARYASINTHRGIEQSRRDDIESLGYVFMYF 205
>AY836556-1|AAW21314.1| 479|Caenorhabditis elegans casein kinase I
epsilon/delta kin-20A protein.
Length = 479
Score = 25.8 bits (54), Expect = 5.8
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +2
Query: 74 DESQLKGLAKYFNSQTNRGRLNTARATYAVMGAVILYF 187
+ L G A+Y + T+RG + R +G V +YF
Sbjct: 350 ENKNLTGTARYASINTHRGIEQSRRDDIESLGYVFMYF 387
>AL032656-4|CAB60309.2| 407|Caenorhabditis elegans Hypothetical
protein Y106G6E.6 protein.
Length = 407
Score = 25.4 bits (53), Expect = 7.6
Identities = 10/38 (26%), Positives = 19/38 (50%)
Frame = +2
Query: 74 DESQLKGLAKYFNSQTNRGRLNTARATYAVMGAVILYF 187
+ L G A+Y + T+ G+ + R +G + +YF
Sbjct: 190 EHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYF 227
>AF016684-5|AAB66207.2| 297|Caenorhabditis elegans Hypothetical
protein F45C12.8 protein.
Length = 297
Score = 25.4 bits (53), Expect = 7.6
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = -1
Query: 292 CSHDFNYVLYNLTIPYRNMLINFACNSFLGFRFQC 188
C+ DF ++ N ++ + ++F N GFR +C
Sbjct: 158 CNEDFKLMMENQSVQLDSFQLDFDDNCEQGFRDKC 192
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,361,188
Number of Sequences: 27780
Number of extensions: 106715
Number of successful extensions: 307
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 304
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 307
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 313072342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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