Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10b07
         (670 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    31   0.043
AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein p...    28   0.31 
AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein p...    27   0.53 
AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykin...    25   2.2  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   3.8  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   3.8  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    24   3.8  

>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 30.7 bits (66), Expect = 0.043
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +1

Query: 559 VDGQPMKVQLSTSRVRQRPGMG-DPEQCYRCGRGGHWS 669
           +DG  +K+    S+VR  P    +  +CYRC   GHW+
Sbjct: 635 LDGTKIKLGFCVSKVRAAPPTPRERVRCYRCLELGHWA 672


>AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein
           protein.
          Length = 429

 Score = 27.9 bits (59), Expect = 0.31
 Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = +1

Query: 565 GQPMKVQLSTSRVRQRPGMGDPEQ-CYRCGRGGH 663
           GQ + V    S +++ P +   +Q CYRC   GH
Sbjct: 339 GQKLTVSCCISNIKEAPAINLQQQRCYRCLERGH 372


>AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein
           protein.
          Length = 344

 Score = 27.1 bits (57), Expect = 0.53
 Identities = 39/174 (22%), Positives = 79/174 (45%), Gaps = 7/174 (4%)
 Frame = +1

Query: 169 LSDKTTEADLRPLFEKYGTVVECDIVRNYG--FVHMENEQVGREAIQNLNGELVHGQAIK 342
           +SD T+E +L  L ++   + + D +++ G     +   Q G   ++   G      A K
Sbjct: 122 ISDCTSE-ELAKLLKE---MKQSDALKSVGETISKVRRAQNGGMLLELKQGSSASAIAPK 177

Query: 343 I-EAAKSRKAPST--PTTKIFVGNLTDKTRAPEVRELFQ-KFGTVVECDIVR-NYGFVHL 507
           + EA K + +  T  P+  I + +L + T   EV E  + +    +E D ++   G    
Sbjct: 178 VKEAVKGKASVRTLAPSKMIEIMHLDEITTPEEVAESVKAQLNIEIEIDRIKMKKGRAAG 237

Query: 508 DATGDVNDAIKELNGMMVDGQPMKVQLSTSRVRQRPGMGDPEQCYRCGRGGHWS 669
                +N ++ +    +  G+ +KV  S   +R+   + + ++CY+C + GH S
Sbjct: 238 TQWARINVSLPDFQSFLNLGK-LKVGWSICHIRE---VMEEQKCYKCWKVGHTS 287


>AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykinin
           receptor protein.
          Length = 450

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = -1

Query: 652 GHSGSTARGRPCPAAAGHDSSTTAPSWA 569
           G+  +      CPA  G + S T P W+
Sbjct: 14  GNKSTAGTSSCCPAGTGLNGSGTEPGWS 41


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 16/46 (34%), Positives = 20/46 (43%)
 Frame = +1

Query: 178  KTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNG 315
            KT  AD RP        +  +IV  YGF   E  Q+G +     NG
Sbjct: 1313 KTVVADFRPYR------ISEEIVTYYGFEPYEQNQIGSDGRWKWNG 1352


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 16/46 (34%), Positives = 20/46 (43%)
 Frame = +1

Query: 178  KTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNG 315
            KT  AD RP        +  +IV  YGF   E  Q+G +     NG
Sbjct: 1314 KTVVADFRPYR------ISEEIVTYYGFEPYEQNQIGSDGRWKWNG 1353


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -1

Query: 664 SGPRGHSGSTARGRPCPAAAGHDSSTT 584
           SGP+G +G    GRP P     D   T
Sbjct: 337 SGPKGDAGVPGYGRPGPQGEKGDIGLT 363


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 691,653
Number of Sequences: 2352
Number of extensions: 14585
Number of successful extensions: 38
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66904800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)