Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10b06
         (674 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.7  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    23   1.7  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    23   1.7  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   4.0  
DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory pro...    21   7.0  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   9.2  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   9.2  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   9.2  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   9.2  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +1

Query: 349 ELLFYVRPLRWITDRDDSADTKRHQFH 429
           E+   +R  RWI +RD S  T    +H
Sbjct: 908 EICNRIRNQRWIVNRDTSGATGPFAYH 934


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = +2

Query: 353 CYFMFGLCVGSPTVMIPQIRKDINSTIVINEDMASWIPAIHSY 481
           C  +FG C+ +  V+  ++ K+I    V    +A W+P  H Y
Sbjct: 102 CSVIFG-CIFALKVI--EVFKNIEEVDVAFRSLAVWVPYKHLY 141


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = +2

Query: 353 CYFMFGLCVGSPTVMIPQIRKDINSTIVINEDMASWIPAIHSY 481
           C  +FG C+ +  V+  ++ K+I    V    +A W+P  H Y
Sbjct: 102 CSVIFG-CIFALKVI--EVFKNIEEVDVAFRSLAVWVPYKHLY 141


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 11/43 (25%), Positives = 17/43 (39%)
 Frame = +1

Query: 301 YTKAAAKTAPHQYWTMELLFYVRPLRWITDRDDSADTKRHQFH 429
           Y +     +PH  W   +   V+      D++DS  T    FH
Sbjct: 22  YQQVMEPRSPHTAWQFGVSQIVKREPMDEDKNDSGVTSGSDFH 64


>DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory
           protein 1 protein.
          Length = 112

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +2

Query: 269 MADLSDETNTYTRKPLLRQLLISTGPWNC 355
           ++D + E+    R+ LLRQL  +TG   C
Sbjct: 30  ISDEAIESTLNDRRYLLRQLKCATGEAPC 58


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 5/6 (83%), Positives = 5/6 (83%)
 Frame = -1

Query: 482 CSCGWP 465
           C CGWP
Sbjct: 578 CGCGWP 583


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 5/6 (83%), Positives = 5/6 (83%)
 Frame = -1

Query: 482 CSCGWP 465
           C CGWP
Sbjct: 577 CGCGWP 582


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -1

Query: 413 FVSAESSRSVIQRRGRT*NSSS 348
           F S+ESS++ +   G   NSSS
Sbjct: 483 FYSSESSQNQVAPTGENSNSSS 504


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -1

Query: 413 FVSAESSRSVIQRRGRT*NSSS 348
           F S+ESS++ +   G   NSSS
Sbjct: 431 FYSSESSQNQVAPTGENSNSSS 452


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,293
Number of Sequences: 336
Number of extensions: 3349
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)