Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10b06
         (674 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    22   4.7  
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              21   8.1  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    21   8.1  

>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +2

Query: 431 IVINEDMASWIPAIHSYSALPWVFILP 511
           +V+   +A W+P    Y A P+V + P
Sbjct: 310 VVVGGFVACWLPFFILYLATPFVPVEP 336


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 9/28 (32%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = +2

Query: 539 KSYILV-CIFACIGFLTHYCSKTIIHVI 619
           K+++++  I  C+G +TH   KT I  +
Sbjct: 2   KTFVIIFAICVCVGAMTHEELKTGIQTL 29


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 13/45 (28%), Positives = 22/45 (48%)
 Frame = +2

Query: 314 LLRQLLISTGPWNCYFMFGLCVGSPTVMIPQIRKDINSTIVINED 448
           LL+Q+ I   P N        +G P  ++ Q    +N+T+ I +D
Sbjct: 168 LLKQIEI---PHNIAVNASTGMGGPVSLVVQAMDPMNTTVYIADD 209


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,201
Number of Sequences: 438
Number of extensions: 3933
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20464920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)