Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10b04
         (396 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          22   2.9  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          22   2.9  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          22   2.9  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          22   2.9  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          22   2.9  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          22   2.9  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          22   2.9  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    22   2.9  
AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding prote...    22   2.9  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   5.1  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   5.1  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        20   9.0  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    20   9.0  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    20   9.0  

>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +3

Query: 213 ERKRKYAEFYRTYDAEKEFEEMRKKGLFQ 299
           ER R+  E+    + E+E E ++KK + +
Sbjct: 34  ERLRRRREWMIQQEREREHERLKKKMILE 62


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +3

Query: 213 ERKRKYAEFYRTYDAEKEFEEMRKKGLFQ 299
           ER R+  E+    + E+E E ++KK + +
Sbjct: 34  ERLRRRREWMIQQEREREHERLKKKMILE 62


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +3

Query: 213 ERKRKYAEFYRTYDAEKEFEEMRKKGLFQ 299
           ER R+  E+    + E+E E ++KK + +
Sbjct: 34  ERLRRRREWMIQQEREREHERLKKKMILE 62


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +3

Query: 213 ERKRKYAEFYRTYDAEKEFEEMRKKGLFQ 299
           ER R+  E+    + E+E E ++KK + +
Sbjct: 34  ERLRRRREWMIQQEREREHERLKKKMILE 62


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +3

Query: 213 ERKRKYAEFYRTYDAEKEFEEMRKKGLFQ 299
           ER R+  E+    + E+E E ++KK + +
Sbjct: 34  ERLRRRREWMIQQEREREHERLKKKMILE 62


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +3

Query: 213 ERKRKYAEFYRTYDAEKEFEEMRKKGLFQ 299
           ER R+  E+    + E+E E ++KK + +
Sbjct: 34  ERLRRRREWMIQQEREREHERLKKKMILE 62


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +3

Query: 213 ERKRKYAEFYRTYDAEKEFEEMRKKGLFQ 299
           ER R+  E+    + E+E E ++KK + +
Sbjct: 34  ERLRRRREWMIQQEREREHERLKKKMILE 62


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +3

Query: 213 ERKRKYAEFYRTYDAEKEFEEMRKKGLFQ 299
           ER R+  E+    + E+E E ++KK + +
Sbjct: 34  ERLRRRREWMIQQEREREHERLKKKMILE 62


>AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +3

Query: 249 YDAEKEFEEMRKKGLFQSC 305
           Y++  E E+M+K G F++C
Sbjct: 41  YESNSE-EQMKKLGCFEAC 58


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 231 AEFYRTYDAEKEFEEMRKK 287
           AE+Y T  A+K+F   +KK
Sbjct: 21  AEYYDTKTADKDFLLKQKK 39


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 231 AEFYRTYDAEKEFEEMRKK 287
           AE+Y T  A+K+F   +KK
Sbjct: 21  AEYYDTKTADKDFLLKQKK 39


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -1

Query: 42  MPNYTVGHSRQ 10
           M NYT+GH  Q
Sbjct: 166 MVNYTLGHHHQ 176


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +1

Query: 76  LAKVQYRQRASLRCEVSSTPSS 141
           L  V     A  RCEVS+ P +
Sbjct: 339 LLSVHLGGNAEFRCEVSTHPQA 360


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +1

Query: 76  LAKVQYRQRASLRCEVSSTPSS 141
           L  V     A  RCEVS+ P +
Sbjct: 339 LLSVHLGGNAEFRCEVSTHPQA 360


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,111
Number of Sequences: 438
Number of extensions: 1457
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9761793
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)