Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10a23
         (453 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q16LH8 Cluster: Putative uncharacterized protein; n=2; ...    44   0.001
UniRef50_Q16LI2 Cluster: Putative uncharacterized protein; n=3; ...    39   0.058
UniRef50_Q16LH5 Cluster: Putative uncharacterized protein; n=2; ...    36   0.54 
UniRef50_A1RBG1 Cluster: Putative uncharacterized protein; n=1; ...    34   1.6  
UniRef50_A6RKT7 Cluster: Predicted protein; n=2; Sclerotiniaceae...    33   2.2  
UniRef50_Q6CCA5 Cluster: Similarity; n=1; Yarrowia lipolytica|Re...    33   3.8  
UniRef50_UPI00005846BD Cluster: PREDICTED: similar to Hey1 prote...    32   5.0  
UniRef50_A7KAA8 Cluster: Putative uncharacterized protein z848R;...    32   5.0  
UniRef50_Q8N0M9 Cluster: Peritrophin-like protein 1; n=1; Ctenoc...    32   5.0  
UniRef50_A1D741 Cluster: Putative uncharacterized protein; n=2; ...    32   5.0  
UniRef50_A7SLH6 Cluster: Predicted protein; n=1; Nematostella ve...    32   6.6  
UniRef50_UPI0000D9AB0C Cluster: PREDICTED: hypothetical protein;...    31   8.7  
UniRef50_Q2JCS7 Cluster: Twin-arginine translocation pathway sig...    31   8.7  
UniRef50_A2VU51 Cluster: DNA-binding protein H-NS; n=1; Burkhold...    31   8.7  
UniRef50_Q74N85 Cluster: NEQ087; n=1; Nanoarchaeum equitans|Rep:...    31   8.7  
UniRef50_Q9H665 Cluster: Transmembrane protein 149 precursor; n=...    31   8.7  

>UniRef50_Q16LH8 Cluster: Putative uncharacterized protein; n=2;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 277

 Score = 44.4 bits (100), Expect = 0.001
 Identities = 25/54 (46%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
 Frame = +3

Query: 222 TTIGSTCLDCTTKQVCTKVGGIQRAC--LDPTLPYCNLGECSATPA--EGCEPA 371
           T + STC  C    VC       R C  L P  PYCN GECSATP+  E C P+
Sbjct: 47  TRMFSTCGSCEAVNVCLGSSMDWRYCRSLTPDKPYCNNGECSATPSYNEYCPPS 100


>UniRef50_Q16LI2 Cluster: Putative uncharacterized protein; n=3;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 261

 Score = 38.7 bits (86), Expect = 0.058
 Identities = 23/59 (38%), Positives = 25/59 (42%), Gaps = 5/59 (8%)
 Frame = +3

Query: 234 STCLDCTTKQVCTKVGG-IQRACLDPTLPYCNLGE----CSATPAEGCEPASGASVAPT 395
           S C  CTT  VC      I   C   T  YC  G+    CS  PA GC   S  +VA T
Sbjct: 49  SVCTSCTTLSVCISANDVIDVPCNSTTNAYCQPGDVEASCSTEPATGCAAPSDETVAIT 107


>UniRef50_Q16LH5 Cluster: Putative uncharacterized protein; n=2;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 270

 Score = 35.5 bits (78), Expect = 0.54
 Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 4/73 (5%)
 Frame = +3

Query: 225 TIGSTCLDCTTKQVCTKVGGIQRACL--DPTLPYCNLGECSAT--PAEGCEPASGASVAP 392
           ++ +TC DC    VC       + C    P+ P+C  G CSAT     GC P SG +   
Sbjct: 50  SVYTTCKDCNNVLVCLGSTQSTKNCTAATPSTPFCVNGACSATYDSVAGCTP-SGVACTG 108

Query: 393 TA*YSILKHTRKY 431
              Y   K+ + Y
Sbjct: 109 VGFYPDAKNCQIY 121


>UniRef50_A1RBG1 Cluster: Putative uncharacterized protein; n=1;
           Arthrobacter aurescens TC1|Rep: Putative uncharacterized
           protein - Arthrobacter aurescens (strain TC1)
          Length = 496

 Score = 33.9 bits (74), Expect = 1.6
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = +3

Query: 240 CLDCTTKQVCTKVGGIQRACLDPTLPYC-NLGECSATPAEGCEPASGASVAPT 395
           C    +   CT+VGG +R C  P+LP C +L    +  A+     +GA+  P+
Sbjct: 14  CPASFSTDACTRVGGGRRCCGAPSLPKCLSLKRTGSVMADSAPVGAGAAPQPS 66


>UniRef50_A6RKT7 Cluster: Predicted protein; n=2;
           Sclerotiniaceae|Rep: Predicted protein - Botryotinia
           fuckeliana B05.10
          Length = 254

 Score = 33.5 bits (73), Expect = 2.2
 Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = +3

Query: 231 GSTCLDCTTKQVC-TKVGGIQRACLDPTLPYCNLGECSATPAEGCEPASGASVA 389
           G+T   C T Q C TK G     C D T  Y +LG+C+ T  +      GAS +
Sbjct: 103 GTTGYYCPTGQTCKTKTGSAPYCCDDSTDCYNSLGKCADTSWQQYRVTIGASTS 156


>UniRef50_Q6CCA5 Cluster: Similarity; n=1; Yarrowia lipolytica|Rep:
           Similarity - Yarrowia lipolytica (Candida lipolytica)
          Length = 609

 Score = 32.7 bits (71), Expect = 3.8
 Identities = 20/77 (25%), Positives = 35/77 (45%)
 Frame = +1

Query: 142 AGTMAQSTLGYLHGSHPLPGTRSGLLAPPSVVLA*IALPSKFVQK*EVYRGRVWTRLFLT 321
           AG      +G++H +     T  GL  P    L  + LP + ++    Y+G +W R  ++
Sbjct: 417 AGGDPGKEVGHIHFAKTQDKTVGGLHDPFCDELVTVPLPLQHLEPTASYKGLIWCREAIS 476

Query: 322 ATSENAPLPPLKDVNRP 372
            TS+   +P   D+  P
Sbjct: 477 YTSDVVLVPTFVDLKAP 493


>UniRef50_UPI00005846BD Cluster: PREDICTED: similar to Hey1 protein;
           n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
           similar to Hey1 protein - Strongylocentrotus purpuratus
          Length = 317

 Score = 32.3 bits (70), Expect = 5.0
 Identities = 20/70 (28%), Positives = 30/70 (42%)
 Frame = -3

Query: 385 TDAPEAGSHPSAGVAEHSPRLQ*GRVGSRHALCIPPTFVQTCLVVQSRQVLPMVVQGAHC 206
           +  P     P +G  +H+P    G     H   +PP    T +   SRQ+LPM+   +H 
Sbjct: 168 SQTPALPPPPHSG-PQHNPGGGGGATSEHHQSSLPPA--ATSVSENSRQMLPMITSTSHA 224

Query: 205 GYQGADAIHG 176
             Q   + HG
Sbjct: 225 ETQLQTSCHG 234


>UniRef50_A7KAA8 Cluster: Putative uncharacterized protein z848R;
           n=1; Chlorella virus ATCV-1|Rep: Putative
           uncharacterized protein z848R - Chlorella virus ATCV-1
          Length = 179

 Score = 32.3 bits (70), Expect = 5.0
 Identities = 16/32 (50%), Positives = 17/32 (53%), Gaps = 4/32 (12%)
 Frame = -2

Query: 239 STTDGGARS----PLRVPGSGCDPWRYPRVDC 156
           S  DGG R     P R PGSG  PW+ P  DC
Sbjct: 71  SPLDGGPRKRPRCPRRYPGSGHGPWQNPADDC 102


>UniRef50_Q8N0M9 Cluster: Peritrophin-like protein 1; n=1;
           Ctenocephalides felis|Rep: Peritrophin-like protein 1 -
           Ctenocephalides felis (Cat flea)
          Length = 272

 Score = 32.3 bits (70), Expect = 5.0
 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 6/57 (10%)
 Frame = +3

Query: 219 CTT--IGSTCLDCTTKQVC----TKVGGIQRACLDPTLPYCNLGECSATPAEGCEPA 371
           CT   +G+ C DC+T ++C    T +  I     +   P+C    CS+ P E C+ A
Sbjct: 48  CTNKQLGTFCHDCSTLKLCAGQETPITTINCRDSNSDAPFCVDDMCSSKPGENCKTA 104


>UniRef50_A1D741 Cluster: Putative uncharacterized protein; n=2;
           Eurotiomycetidae|Rep: Putative uncharacterized protein -
           Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
           181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
           3700 / NRRL 181))
          Length = 216

 Score = 32.3 bits (70), Expect = 5.0
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = +1

Query: 127 PAVGEAGTMAQSTLGYLHGSHPLPGTRSGLLAPPS 231
           P +G+A       LG   GS P+PG +SG L  PS
Sbjct: 19  PPLGDANRFKSPILGSPRGSPPIPGAQSGGLPSPS 53


>UniRef50_A7SLH6 Cluster: Predicted protein; n=1; Nematostella
            vectensis|Rep: Predicted protein - Nematostella vectensis
          Length = 3102

 Score = 31.9 bits (69), Expect = 6.6
 Identities = 20/59 (33%), Positives = 25/59 (42%)
 Frame = +3

Query: 219  CTTIGSTCLDCTTKQVCTKVGGIQRACLDPTLPYCNLGECSATPAEGCEPASGASVAPT 395
            C   GS+CLDC  +        I  +CL+PT P  N    + T      PASG     T
Sbjct: 1638 CGGDGSSCLDCAGQANGPSKVDICGSCLNPTSPSFN---SACTKLSAVTPASGVDTGGT 1693


>UniRef50_UPI0000D9AB0C Cluster: PREDICTED: hypothetical protein;
           n=1; Macaca mulatta|Rep: PREDICTED: hypothetical protein
           - Macaca mulatta
          Length = 520

 Score = 31.5 bits (68), Expect = 8.7
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = +2

Query: 68  CFMHHASSSFGCPSTCHRWCRRLGRLEQWRSQPLDTSMDR 187
           CF+  +  S GCP+ C    R LGRL   R+   D    R
Sbjct: 116 CFLSSSDFSEGCPAVCPAASRALGRLRHDRNAREDAGWGR 155


>UniRef50_Q2JCS7 Cluster: Twin-arginine translocation pathway signal
           precursor; n=2; Frankia|Rep: Twin-arginine translocation
           pathway signal precursor - Frankia sp. (strain CcI3)
          Length = 486

 Score = 31.5 bits (68), Expect = 8.7
 Identities = 20/53 (37%), Positives = 21/53 (39%)
 Frame = -2

Query: 269 TNLLGSAI*ASTTDGGARSPLRVPGSGCDPWRYPRVDCAIVPASPTAGTTGGR 111
           T   G+A        GA   LR PG G D WR   V C   PA       GGR
Sbjct: 123 TGTAGTADAGGAVSRGAEIRLRQPGGGFDAWRPLAVGC---PAERDDSPAGGR 172


>UniRef50_A2VU51 Cluster: DNA-binding protein H-NS; n=1;
           Burkholderia cenocepacia PC184|Rep: DNA-binding protein
           H-NS - Burkholderia cenocepacia PC184
          Length = 186

 Score = 31.5 bits (68), Expect = 8.7
 Identities = 21/48 (43%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = -2

Query: 239 STTDGGARSPLRVPGSGCDPWRYPRVDCAIVPASPTAGTTG-GRLRDS 99
           S   GG R+P   PGSG    R P  DC I P  P  G  G G  R S
Sbjct: 32  SAGPGGRRAP---PGSGSGDRRCPANDCRIWPDGPGPGLRGTGAARTS 76


>UniRef50_Q74N85 Cluster: NEQ087; n=1; Nanoarchaeum equitans|Rep:
           NEQ087 - Nanoarchaeum equitans
          Length = 595

 Score = 31.5 bits (68), Expect = 8.7
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = -3

Query: 313 RVGSRHALCIPPTFVQTCLVVQSRQVLPMVVQGAHCGYQGADAIHGG 173
           R+GS H +   P   +   + +SR +    +QG  CGY+G   I  G
Sbjct: 237 RIGSTHVINYNPKTKEVEYICESRHLKKKTIQG--CGYKGKTTIRNG 281


>UniRef50_Q9H665 Cluster: Transmembrane protein 149 precursor; n=14;
           Eutheria|Rep: Transmembrane protein 149 precursor - Homo
           sapiens (Human)
          Length = 355

 Score = 31.5 bits (68), Expect = 8.7
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +3

Query: 306 PTLPYCNLGECSATPAEGCEPASGASVAPT 395
           P    C+ G+C+   AE C P  G +V PT
Sbjct: 71  PPFRKCSSGQCNPDGAELCSPCGGGAVTPT 100


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 444,510,096
Number of Sequences: 1657284
Number of extensions: 8882582
Number of successful extensions: 26818
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 25611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26798
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 23511729640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)