BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10a22
(394 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439060-14|CAD27765.1| 471|Anopheles gambiae putative acetyltr... 26 0.57
AJ697727-1|CAG26920.1| 285|Anopheles gambiae putative odorant-b... 25 1.3
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi... 23 3.0
AM085517-1|CAJ30215.1| 339|Anopheles gambiae putative angiotens... 23 3.0
AJ973476-1|CAJ01523.1| 126|Anopheles gambiae hypothetical prote... 23 3.0
AJ697729-1|CAG26922.1| 126|Anopheles gambiae putative sensory a... 23 3.0
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 23 5.3
AJ441131-1|CAD29630.1| 567|Anopheles gambiae putative chitin bi... 22 7.0
AJ439060-17|CAD27768.1| 568|Anopheles gambiae putative chitin b... 22 7.0
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos... 22 9.2
>AJ439060-14|CAD27765.1| 471|Anopheles gambiae putative
acetyltransferase protein.
Length = 471
Score = 25.8 bits (54), Expect = 0.57
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +1
Query: 136 HR*SSQRLQP*WKRLRTYRQRCILRGPSPRPTLLQA 243
+R ++++ WKR+RT R + + P P+L+ A
Sbjct: 54 YRTCNRQINQQWKRIRTERLKTLEHSPEMPPSLIIA 89
>AJ697727-1|CAG26920.1| 285|Anopheles gambiae putative
odorant-binding protein OBPjj17 protein.
Length = 285
Score = 24.6 bits (51), Expect = 1.3
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +2
Query: 161 NPNGNGYEPIDNGAYYV 211
N NGNGY D+G Y V
Sbjct: 269 NRNGNGYGAGDDGGYVV 285
>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
channel alpha subunitprotein.
Length = 2139
Score = 23.4 bits (48), Expect = 3.0
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +1
Query: 211 GPSPRPTLLQAYPFP 255
GP P PTL Q P P
Sbjct: 71 GPQPDPTLEQGVPVP 85
>AM085517-1|CAJ30215.1| 339|Anopheles gambiae putative angiotensin
converting enzymeprecursor protein.
Length = 339
Score = 23.4 bits (48), Expect = 3.0
Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 6/39 (15%)
Frame = +2
Query: 122 DNRPYIVNPPKDY------NPNGNGYEPIDNGAYYVDPP 220
D PY NP +DY NPN Y P D +PP
Sbjct: 183 DRTPY--NPSRDYDDRNRYNPNARPYNPNDPSFGGRNPP 219
>AJ973476-1|CAJ01523.1| 126|Anopheles gambiae hypothetical protein
protein.
Length = 126
Score = 23.4 bits (48), Expect = 3.0
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +2
Query: 47 MKFFMIFVLALLAMANAQ 100
MKFF++ LAL+A AQ
Sbjct: 1 MKFFVVVALALVAAVAAQ 18
>AJ697729-1|CAG26922.1| 126|Anopheles gambiae putative sensory
appendage protein SAP-3 protein.
Length = 126
Score = 23.4 bits (48), Expect = 3.0
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +2
Query: 47 MKFFMIFVLALLAMANAQ 100
MKFF++ LAL+A AQ
Sbjct: 1 MKFFVVVALALVAAVAAQ 18
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 22.6 bits (46), Expect = 5.3
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 299 NEIMY*QYISKFHMNLCQ 352
N Y +Y+SK NLC+
Sbjct: 448 NRFRYRRYLSKIQRNLCR 465
>AJ441131-1|CAD29630.1| 567|Anopheles gambiae putative chitin
binding protein protein.
Length = 567
Score = 22.2 bits (45), Expect = 7.0
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +2
Query: 137 IVNPPKDYNPNGNGYEPIDNGAYYVDPP 220
++N PK+Y P G DN VD P
Sbjct: 349 VMNAPKEYYPVGYDKNFDDNFTSKVDLP 376
>AJ439060-17|CAD27768.1| 568|Anopheles gambiae putative chitin
binding protein protein.
Length = 568
Score = 22.2 bits (45), Expect = 7.0
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +2
Query: 137 IVNPPKDYNPNGNGYEPIDNGAYYVDPP 220
++N PK+Y P G DN VD P
Sbjct: 357 VMNAPKEYYPVGYDKNFDDNFTSKVDLP 384
>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
polyprotein protein.
Length = 1726
Score = 21.8 bits (44), Expect = 9.2
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 5/70 (7%)
Frame = +3
Query: 111 TNLLTTARTSLILPKITTLMETATNLSTTVHIT-WTLPK----ADLTSSLPLSLVLAVGS 275
T TT LILPKI T + S T+ + W LPK AD T S+ + +G+
Sbjct: 511 TTEYTTCLEFLILPKIATDLP-----SETMDVRGWKLPKDVRLADPTFHERGSIDMLIGA 565
Query: 276 KEYLRKLITK 305
++ + K
Sbjct: 566 DTFVEMIKAK 575
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 411,003
Number of Sequences: 2352
Number of extensions: 9224
Number of successful extensions: 62
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 62
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 30784536
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -