Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10a21
         (680 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   4.0  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      21   7.1  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   7.1  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   9.3  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -1

Query: 236 LCIYYN*VAFRSIICAWSYKYY 171
           LC YY   AF  ++C + Y YY
Sbjct: 98  LCTYYFYYAFIILLCVY-YFYY 118


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3

Query: 447 RPCTRVIIESVIPQ 488
           RPCT V   +VIPQ
Sbjct: 128 RPCTGVEESAVIPQ 141


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 165 CIIVFVTPCTYDRTKSNLIV 224
           C+ +F+ P   DR +  LIV
Sbjct: 133 CVAMFIVPYFQDRREMPLIV 152


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/13 (61%), Positives = 12/13 (92%)
 Frame = +2

Query: 98  IRKELANVPVVAH 136
           IR+E+ANV V+A+
Sbjct: 269 IRREIANVQVLAY 281


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,504
Number of Sequences: 336
Number of extensions: 3373
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)