Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10a21
         (680 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ999006-1|ABJ99082.1|  282|Anopheles gambiae voltage-dependent ...    23   6.7  
AY137768-1|AAN16031.1|  282|Anopheles gambiae porin protein.           23   6.7  
AY082909-1|AAL89811.1|  282|Anopheles gambiae porin protein.           23   6.7  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    23   6.7  

>DQ999006-1|ABJ99082.1|  282|Anopheles gambiae voltage-dependent
           anion channel protein.
          Length = 282

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +2

Query: 227 RYKVRFCFDRIRRIFNRFVELSGPI 301
           R+K  +  DR+R   +  V+LSGP+
Sbjct: 112 RFKTAYSHDRVRVDADFNVDLSGPL 136


>AY137768-1|AAN16031.1|  282|Anopheles gambiae porin protein.
          Length = 282

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +2

Query: 227 RYKVRFCFDRIRRIFNRFVELSGPI 301
           R+K  +  DR+R   +  V+LSGP+
Sbjct: 112 RFKTAYSHDRVRVDADFNVDLSGPL 136


>AY082909-1|AAL89811.1|  282|Anopheles gambiae porin protein.
          Length = 282

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +2

Query: 227 RYKVRFCFDRIRRIFNRFVELSGPI 301
           R+K  +  DR+R   +  V+LSGP+
Sbjct: 112 RFKTAYSHDRVRVDADFNVDLSGPL 136


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = +1

Query: 508  DHHKKNLSEE*KIKKN 555
            +HH KNLS+  +IKK+
Sbjct: 987  EHHLKNLSDPDQIKKS 1002


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 683,471
Number of Sequences: 2352
Number of extensions: 13585
Number of successful extensions: 26
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68577420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)