Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10a21
         (680 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    21   8.2  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    21   8.2  

>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -2

Query: 211 LFVRSYVHGVTNTIIHT*RMTPQVPVCDHRNIS*FLTNM 95
           L V  YV G+ NT+ HT      +P C    I+ F  +M
Sbjct: 24  LVVGPYVIGLMNTMTHT-TNAFCLPFCGPNVINPFFCDM 61


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -2

Query: 211 LFVRSYVHGVTNTIIHT*RMTPQVPVCDHRNIS*FLTNM 95
           L V  YV G+ NT+ HT      +P C    I+ F  +M
Sbjct: 23  LVVGPYVIGLMNTMTHT-TNAFCLPFCGPNVINPFFCDM 60


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,813
Number of Sequences: 438
Number of extensions: 4394
Number of successful extensions: 7
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20708550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)