Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10a20
         (605 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0EEF4 Cluster: Candidate olfactory receptor; n=1; Bomb...   162   5e-39
UniRef50_Q8MMI2 Cluster: Putative chemosensory receptor 4; n=1; ...    41   0.026
UniRef50_P53142 Cluster: Vacuolar protein sorting-associated pro...    35   1.3  
UniRef50_Q6KZQ9 Cluster: Putative uncharacterized protein; n=2; ...    35   1.7  
UniRef50_Q8I4X9 Cluster: Putative uncharacterized protein; n=1; ...    34   3.0  
UniRef50_Q4SNX3 Cluster: Chromosome 15 SCAF14542, whole genome s...    33   6.9  
UniRef50_Q6DVF9 Cluster: NADH-ubiquinone oxidoreductase chain 4;...    33   6.9  

>UniRef50_Q0EEF4 Cluster: Candidate olfactory receptor; n=1; Bombyx
           mori|Rep: Candidate olfactory receptor - Bombyx mori
           (Silk moth)
          Length = 445

 Score =  162 bits (394), Expect = 5e-39
 Identities = 78/80 (97%), Positives = 78/80 (97%)
 Frame = +3

Query: 366 INSDLQTYSSSLTDKMLHXLTIGMLLITSVIIVTDFTFVMYLADLNHRQLLIAIMYWCYY 545
           INSDL TYSSSLTDKMLH LTIGMLLITSVIIVTDFTFVMYLADLNHRQLLIAIMYWCYY
Sbjct: 126 INSDLGTYSSSLTDKMLHRLTIGMLLITSVIIVTDFTFVMYLADLNHRQLLIAIMYWCYY 185

Query: 546 CSYFIAHLLEMQFVLIAALA 605
           CSYFIAHLLEMQFVLIAALA
Sbjct: 186 CSYFIAHLLEMQFVLIAALA 205



 Score = 92.3 bits (219), Expect = 8e-18
 Identities = 46/58 (79%), Positives = 46/58 (79%)
 Frame = +2

Query: 194 SIKPRLQCMVPPXXXXXXXXXXXXGIAPLKFVAKQSNIMIRLSTSLCVYSYLLVTALN 367
           SIKPRLQCMVPP            GIAPLKFVAKQSNIMIRLSTSLCVYSYLLVTALN
Sbjct: 4   SIKPRLQCMVPPSLALALRVSRLAGIAPLKFVAKQSNIMIRLSTSLCVYSYLLVTALN 61


>UniRef50_Q8MMI2 Cluster: Putative chemosensory receptor 4; n=1;
           Heliothis virescens|Rep: Putative chemosensory receptor
           4 - Heliothis virescens (Noctuid moth) (Owlet moth)
          Length = 455

 Score = 40.7 bits (91), Expect = 0.026
 Identities = 15/33 (45%), Positives = 25/33 (75%)
 Frame = +2

Query: 266 GIAPLKFVAKQSNIMIRLSTSLCVYSYLLVTAL 364
           G+APL+F ++ +   + +S ++CVYSY+LVT L
Sbjct: 38  GLAPLRFESRSNGFTVSISGAMCVYSYILVTVL 70



 Score = 38.3 bits (85), Expect = 0.14
 Identities = 22/68 (32%), Positives = 36/68 (52%)
 Frame = +3

Query: 393 SSLTDKMLHXLTIGMLLITSVIIVTDFTFVMYLADLNHRQLLIAIMYWCYYCSYFIAHLL 572
           S +T++ L  + +  +LI SV+I  DFTF    A    R+  +   Y  +Y  +F+  +L
Sbjct: 145 SRVTERKLCGIILA-ILIFSVLIADDFTFYALQAKKLDREWDVVTNYLGFYLLWFVVLIL 203

Query: 573 EMQFVLIA 596
           E+QF   A
Sbjct: 204 ELQFAFTA 211


>UniRef50_P53142 Cluster: Vacuolar protein sorting-associated
           protein 73; n=2; Saccharomyces cerevisiae|Rep: Vacuolar
           protein sorting-associated protein 73 - Saccharomyces
           cerevisiae (Baker's yeast)
          Length = 486

 Score = 35.1 bits (77), Expect = 1.3
 Identities = 18/65 (27%), Positives = 36/65 (55%)
 Frame = +3

Query: 399 LTDKMLHXLTIGMLLITSVIIVTDFTFVMYLADLNHRQLLIAIMYWCYYCSYFIAHLLEM 578
           L   ++H L    LL+TS ++V+   F+M +A +NH ++ + I++   Y   F   L  +
Sbjct: 355 LVSLLIHSLPRKPLLMTSTVLVSVTAFIMGIA-MNHNKMNLLIVFSFIYMGVFTMGLNPL 413

Query: 579 QFVLI 593
            F+++
Sbjct: 414 PFIIM 418


>UniRef50_Q6KZQ9 Cluster: Putative uncharacterized protein; n=2;
           Thermoplasmatales|Rep: Putative uncharacterized protein
           - Picrophilus torridus
          Length = 156

 Score = 34.7 bits (76), Expect = 1.7
 Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
 Frame = +3

Query: 261 WPESHP*NSSLNRVTL*-YVCPPAYVYTAIYLLPL*INSDLQTYSSSLTDKMLHXLTIGM 437
           WPES+  N    R  L  +V     +YT +    L +   + TY   L   +      G 
Sbjct: 27  WPESYKLNDEKMRTRLLGFVGKRFALYTNVSFGLLIVTGLIMTYKYLLNFNLYFKSLFGE 86

Query: 438 LLITSVIIVTDFTFVMYLADLNHRQLLIAI 527
           LL T+ I+V     VMY  ++ H +L++ +
Sbjct: 87  LLFTAEILVIILLIVMYGNNIYHGKLIVRL 116


>UniRef50_Q8I4X9 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 1482

 Score = 33.9 bits (74), Expect = 3.0
 Identities = 14/30 (46%), Positives = 21/30 (70%)
 Frame = -2

Query: 499 KSARYMTNVKSVTIITEVINNIPIVSXCSI 410
           K+ RY+TN+K+V  IT + NNI +V   +I
Sbjct: 5   KNVRYITNIKNVRYITNIKNNIQMVENAAI 34


>UniRef50_Q4SNX3 Cluster: Chromosome 15 SCAF14542, whole genome
           shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 15
           SCAF14542, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 352

 Score = 32.7 bits (71), Expect = 6.9
 Identities = 17/50 (34%), Positives = 24/50 (48%)
 Frame = +3

Query: 423 LTIGMLLITSVIIVTDFTFVMYLADLNHRQLLIAIMYWCYYCSYFIAHLL 572
           L +   LI +  IV+ FTFV  + D          +YW  Y  YFI H++
Sbjct: 97  LVLASQLIVTTAIVSVFTFVKPVGDFVREN---PALYWVSYAVYFITHIV 143


>UniRef50_Q6DVF9 Cluster: NADH-ubiquinone oxidoreductase chain 4;
           n=2; Hexapoda|Rep: NADH-ubiquinone oxidoreductase chain
           4 - Podura aquatica (water springtail)
          Length = 470

 Score = 32.7 bits (71), Expect = 6.9
 Identities = 23/92 (25%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
 Frame = +3

Query: 333 VYTAIYLLPL*INSDLQTYSSSL--TDKMLHXLTIGMLLITSVIIVTDFTFVMYLADLNH 506
           +Y ++YLL L I S   TY S +      L  L++G++L+ + I+     F ++  +++ 
Sbjct: 79  IYLSLYLLVLMITSSSSTYLSGVYPITYNLVILSLGLVLVLAFILYNYLAFYLFF-EISI 137

Query: 507 RQLLIAIMYWCYYCSYFIAHLLEMQFVLIAAL 602
              L  +M W Y      A +  + + + A+L
Sbjct: 138 IPTLGLLMGWGYQPERLQAGVYFLMYTMFASL 169


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 491,084,033
Number of Sequences: 1657284
Number of extensions: 8238667
Number of successful extensions: 16518
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 16169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16513
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43147568152
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)