Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10a20
         (605 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69662-6|CAA93501.1|  283|Caenorhabditis elegans Hypothetical pr...    28   5.9  
Z81531-5|CAB04319.1| 1152|Caenorhabditis elegans Hypothetical pr...    27   7.9  

>Z69662-6|CAA93501.1|  283|Caenorhabditis elegans Hypothetical
           protein F56D5.10 protein.
          Length = 283

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = -2

Query: 532 YIMAISSCLWFKSARYMTNVKSVTIITEVINNIPIVSXCSI 410
           +I  I S  WF   + +     VTI+  +   IP  S CS+
Sbjct: 81  FISPIKSSKWFSDTKVVVYCTGVTILITIWLLIPYFSNCSL 121


>Z81531-5|CAB04319.1| 1152|Caenorhabditis elegans Hypothetical
           protein F36D3.5 protein.
          Length = 1152

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 20/69 (28%), Positives = 32/69 (46%)
 Frame = +2

Query: 281 KFVAKQSNIMIRLSTSLCVYSYLLVTALNKFRFTNIQLITYGQDAAXTDYWNVINYLCNY 460
           K++    NIM RL+    + + L V ALN   + N Q     +D   T YW +     N 
Sbjct: 372 KYMFPAENIMNRLANIKDIIAELTV-ALNFMVYPNTQARDLFKDDCHTLYWTLSKLDVNT 430

Query: 461 SDRFHVRHV 487
           S+   V+++
Sbjct: 431 SNAITVKNM 439


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,587,957
Number of Sequences: 27780
Number of extensions: 207098
Number of successful extensions: 471
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 455
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 471
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)