Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10a15
(239 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 23 0.52
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 23 0.69
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 23 0.69
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 23 0.69
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 23 0.69
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 22 0.91
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 22 0.91
DQ435331-1|ABD92646.1| 135|Apis mellifera OBP14 protein. 20 3.7
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 20 4.9
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 20 4.9
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 20 4.9
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 19 6.4
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 23.0 bits (47), Expect = 0.52
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -2
Query: 187 KIILNIQVQRLHNINIYSFSYI*AHI*HICGKQNQNNN 74
KII ++ + +HN N Y ++Y + + N NNN
Sbjct: 313 KIISSLSNKTIHNNNNYKYNYNNNNYNNNNYNNNYNNN 350
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 22.6 bits (46), Expect = 0.69
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -2
Query: 187 KIILNIQVQRLHNINIYSFSYI*AHI*HICGKQNQNNN 74
KII ++ + +HN N Y ++Y + + C K N N
Sbjct: 80 KIISSLSNRTIHNNNNYKYNYNNNNYNNNCKKLYYNIN 117
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.6 bits (46), Expect = 0.69
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -2
Query: 187 KIILNIQVQRLHNINIYSFSYI*AHI*HICGKQNQNNN 74
KII ++ + +HN N Y ++Y + + C K N N
Sbjct: 80 KIISSLSNKTIHNNNNYKYNYNNNNYNNNCKKLYYNIN 117
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.6 bits (46), Expect = 0.69
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -2
Query: 187 KIILNIQVQRLHNINIYSFSYI*AHI*HICGKQNQNNN 74
KII ++ + +HN N Y ++Y + + C K N N
Sbjct: 80 KIISSLSNKTIHNNNNYKYNYNNNNYNNNCKKLYYNIN 117
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.6 bits (46), Expect = 0.69
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -2
Query: 187 KIILNIQVQRLHNINIYSFSYI*AHI*HICGKQNQNNN 74
KII ++ + +HN N Y ++Y + + C K N N
Sbjct: 80 KIISSLSNKTIHNNNNYKYNYNNNNYNNNCKKLYYNIN 117
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.2 bits (45), Expect = 0.91
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -2
Query: 187 KIILNIQVQRLHNINIYSFSY 125
KII ++ + +HN N Y ++Y
Sbjct: 80 KIISSLSNKTIHNNNNYKYNY 100
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 0.91
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -2
Query: 187 KIILNIQVQRLHNINIYSFSY 125
KII ++ + +HN N Y ++Y
Sbjct: 80 KIISSLSNKTIHNNNNYKYNY 100
>DQ435331-1|ABD92646.1| 135|Apis mellifera OBP14 protein.
Length = 135
Score = 20.2 bits (40), Expect = 3.7
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -2
Query: 73 ELLAIEDQHKSLIKICSVVFE 11
ELL E+ K L+ CS + E
Sbjct: 89 ELLIDENSVKQLVSDCSTISE 109
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 19.8 bits (39), Expect = 4.9
Identities = 6/26 (23%), Positives = 12/26 (46%)
Frame = +1
Query: 97 HKCAKYGLIYMKRNKY*CYVTFVPVC 174
+ C K L++ + Y ++P C
Sbjct: 228 YSCLKVDLLFKREFSYYLIQIYIPCC 253
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 19.8 bits (39), Expect = 4.9
Identities = 6/26 (23%), Positives = 12/26 (46%)
Frame = +1
Query: 97 HKCAKYGLIYMKRNKY*CYVTFVPVC 174
+ C K L++ + Y ++P C
Sbjct: 228 YSCLKVDLLFKREFSYYLIQIYIPCC 253
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 19.8 bits (39), Expect = 4.9
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +3
Query: 24 EQILIRLLCWSSMASNSLL 80
E +L+RL C +NS++
Sbjct: 277 EVLLVRLACMFDAQTNSMI 295
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 19.4 bits (38), Expect = 6.4
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = -2
Query: 52 QHKSLIKICSV 20
+H + IK+CSV
Sbjct: 127 KHHNFIKVCSV 137
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,346
Number of Sequences: 438
Number of extensions: 992
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used: 4024224
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)
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