Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10a12
         (682 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein.              33   1.2  
AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related ...    32   1.6  
BC068223-1|AAH68223.1|  195|Homo sapiens SSH2 protein protein.         31   5.0  
BC011636-1|AAH11636.2|  178|Homo sapiens SSH2 protein protein.         31   5.0  
BC008941-1|AAH08941.1|  195|Homo sapiens SSH2 protein protein.         31   5.0  
AB072359-1|BAB84118.1|  195|Homo sapiens hSSH-2A protein.              31   5.0  
AB037805-1|BAA92622.1|  652|Homo sapiens KIAA1384 protein protein.     31   5.0  
AB018288-1|BAA34465.1|  909|Homo sapiens KIAA0745 protein protein.     30   8.8  

>AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein.
          Length = 1349

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 35/138 (25%), Positives = 51/138 (36%)
 Frame = +1

Query: 268 STPINFGSRAPRTSSVIVSQLSSDLSSPKTPLSLCTSATVSL*R*VMMFTATMADLPSAT 447
           STP +  +  P+TS+   S  S       TP  + T++T S         AT + + + T
Sbjct: 14  STPTSSTTSTPQTSTTSASTTSITSGPGTTPSPVPTTSTTSAPTTSTTSAATTSTISAPT 73

Query: 448 VRTKQARKSAGXXXXXXXXXXXXXXXXXXXXXNIWYWESVLTRTATTWPSESTASIVSEP 627
             T  A  ++                            S  +   T+  S STAS  S P
Sbjct: 74  TSTTSAPTTSTTSASTASKTSGLGTTPSPIPTT-----STTSPPTTSTTSASTASKTSGP 128

Query: 628 SGTCSPLNTTKTICSTST 681
             T SP+ TT TI +  T
Sbjct: 129 GTTPSPVPTTSTIFAPRT 146


>AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related tumor
            marker CA125 protein.
          Length = 22152

 Score = 32.3 bits (70), Expect = 1.6
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +1

Query: 550  WYWESVLTRTATTWPSESTASIVSE-PSGTCSPLNTT 657
            W W+   +   TTWPS S +  +S   SG  +P +TT
Sbjct: 2051 WLWDLTTSLPTTTWPSTSLSEALSSGHSGVSNPSSTT 2087


>BC068223-1|AAH68223.1|  195|Homo sapiens SSH2 protein protein.
          Length = 195

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 18/45 (40%), Positives = 27/45 (60%)
 Frame = -3

Query: 644 GLQVPLGSETIDAVDSEGHVVAVRVSTDSQYQILVTLSVQDLEVD 510
           GL +PL S+T+  +D +G      VSTD++  I   +SVQ + VD
Sbjct: 139 GLVLPLWSDTLIHLDGDG---GFSVSTDNRVHIFKPVSVQAMWVD 180


>BC011636-1|AAH11636.2|  178|Homo sapiens SSH2 protein protein.
          Length = 178

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 18/45 (40%), Positives = 27/45 (60%)
 Frame = -3

Query: 644 GLQVPLGSETIDAVDSEGHVVAVRVSTDSQYQILVTLSVQDLEVD 510
           GL +PL S+T+  +D +G      VSTD++  I   +SVQ + VD
Sbjct: 122 GLVLPLWSDTLIHLDGDG---GFSVSTDNRVHIFKPVSVQAMWVD 163


>BC008941-1|AAH08941.1|  195|Homo sapiens SSH2 protein protein.
          Length = 195

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 18/45 (40%), Positives = 27/45 (60%)
 Frame = -3

Query: 644 GLQVPLGSETIDAVDSEGHVVAVRVSTDSQYQILVTLSVQDLEVD 510
           GL +PL S+T+  +D +G      VSTD++  I   +SVQ + VD
Sbjct: 139 GLVLPLWSDTLIHLDGDG---GFSVSTDNRVHIFKPVSVQAMWVD 180


>AB072359-1|BAB84118.1|  195|Homo sapiens hSSH-2A protein.
          Length = 195

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 18/45 (40%), Positives = 27/45 (60%)
 Frame = -3

Query: 644 GLQVPLGSETIDAVDSEGHVVAVRVSTDSQYQILVTLSVQDLEVD 510
           GL +PL S+T+  +D +G      VSTD++  I   +SVQ + VD
Sbjct: 139 GLVLPLWSDTLIHLDGDG---GFSVSTDNRVHIFKPVSVQAMWVD 180


>AB037805-1|BAA92622.1|  652|Homo sapiens KIAA1384 protein protein.
          Length = 652

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
 Frame = +3

Query: 468 KVSWKFIALWENNKVYFKILNTERNQYLVLGVGT-NPNGDHMAFGVNSVDSFRAQWYLQP 644
           K +WK + +   N  +  ++  E   +++ G    NPNG H    V+  D     W   P
Sbjct: 373 KKTWKILTIMPYNSAHHCVVEVENFLFVLGGEDQWNPNGKHSTNFVSRYDPRFNSWIQLP 432

Query: 645 AKYDKDNLFY 674
              ++   FY
Sbjct: 433 PMQERRASFY 442


>AB018288-1|BAA34465.1|  909|Homo sapiens KIAA0745 protein protein.
          Length = 909

 Score = 29.9 bits (64), Expect = 8.8
 Identities = 14/29 (48%), Positives = 21/29 (72%)
 Frame = +1

Query: 82  LCMLQIPTSLTTFWRSSFTIASSLPITTV 168
           LC +QIPTS    WRS+F  +S+L ++T+
Sbjct: 247 LCTVQIPTS----WRSAFLDSSTLQLSTI 271


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,379,161
Number of Sequences: 237096
Number of extensions: 1731137
Number of successful extensions: 4777
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4542
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4777
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7727256732
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)