Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10a12
         (682 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-3800|AAN14054.2|  881|Drosophila melanogaster CG31439-P...    33   0.48 
BT030122-1|ABN49261.1|  540|Drosophila melanogaster IP13510p pro...    29   5.9  
AE014297-3267|AAF56093.1|  660|Drosophila melanogaster CG13830-P...    29   5.9  
AE014134-2225|AAF53207.2|  634|Drosophila melanogaster CG15485-P...    29   5.9  

>AE014297-3800|AAN14054.2|  881|Drosophila melanogaster CG31439-PA
            protein.
          Length = 881

 Score = 32.7 bits (71), Expect = 0.48
 Identities = 37/194 (19%), Positives = 66/194 (34%), Gaps = 1/194 (0%)
 Frame = +1

Query: 103  TSLTTFWRSSFTIASSLPITTVRLKRASIYTRRRRAKSSQM**TN*YETTR*TAWSTPIN 282
            T+ TT   ++ T A++ P TT      +  T      ++    T    TT  T   T   
Sbjct: 550  TTTTTTTTTTTTTATTTPTTTTCTPTTTTTTTTTTTTTT----TTTTTTTTTTCTPTTTT 605

Query: 283  FGSRAPRTSSVIVSQLSSDLSSPKTPLSLCTSATVSL*R*VMMFTATMADL-PSATVRTK 459
              +    T++   +  ++  ++  TP +  T+ T +        T T     P+ T  T 
Sbjct: 606  TTTTTTTTTTTTTTTTTTTTTTTCTPTTTTTTTTTTTTTTTTTTTTTTTTCTPTTTTTTT 665

Query: 460  QARKSAGXXXXXXXXXXXXXXXXXXXXXNIWYWESVLTRTATTWPSESTASIVSEPSGTC 639
                +                             +  T T TT  + +T +     + TC
Sbjct: 666  TTTTTTTTTCTPTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTCAPTTTTTC 725

Query: 640  SPLNTTKTICSTST 681
            +P  TT T C+ +T
Sbjct: 726  TPTTTTTTTCAPTT 739


>BT030122-1|ABN49261.1|  540|Drosophila melanogaster IP13510p
           protein.
          Length = 540

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
 Frame = +3

Query: 468 KVSWKFIALWENNKVYFKILNTERNQYLVLGVGTN---PNGDHMAFGVNS 608
           K +W   A   N K  ++ L ++ N+++++GV TN    +GD++A  V +
Sbjct: 395 KTNWWSSASLRNFKERYRCLESQYNKFILMGVQTNGSLTSGDNIADNVGT 444


>AE014297-3267|AAF56093.1|  660|Drosophila melanogaster CG13830-PA
           protein.
          Length = 660

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 15/46 (32%), Positives = 20/46 (43%)
 Frame = +1

Query: 544 NIWYWESVLTRTATTWPSESTASIVSEPSGTCSPLNTTKTICSTST 681
           N WYW     RT T   + S  S +S P  +    +TT T  +  T
Sbjct: 349 NFWYWYCRTKRTITGTTTTSMPSTLSRPRRSNMTTSTTSTSSTRPT 394


>AE014134-2225|AAF53207.2|  634|Drosophila melanogaster CG15485-PA
           protein.
          Length = 634

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
 Frame = +3

Query: 468 KVSWKFIALWENNKVYFKILNTERNQYLVLGVGTN---PNGDHMAFGVNS 608
           K +W   A   N K  ++ L ++ N+++++GV TN    +GD++A  V +
Sbjct: 489 KTNWWSSASLRNFKERYRCLESQYNKFILMGVQTNGSLTSGDNIADNVGT 538


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,547,935
Number of Sequences: 53049
Number of extensions: 568077
Number of successful extensions: 2165
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2164
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2971922400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)