Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10a11
         (594 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ618917-1|CAF01996.1|  199|Anopheles gambiae putative odorant-b...    23   7.4  
AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    23   7.4  
AJ439060-15|CAD27766.1|   56|Anopheles gambiae putative ribosoma...    23   9.8  

>AJ618917-1|CAF01996.1|  199|Anopheles gambiae putative
           odorant-binding protein OBPjj1 protein.
          Length = 199

 Score = 23.0 bits (47), Expect = 7.4
 Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = +2

Query: 161 DKNCGDPFKSAKPPVECNTQDSINFNTLY-LRNILPVEVLNSV 286
           DK+  D   ++ P  EC ++  +N   +Y  R  +  + LNSV
Sbjct: 59  DKDAADKGAASMPKTECMSECILNSTGIYNRRGDVDEKKLNSV 101


>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 23.0 bits (47), Expect = 7.4
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = -1

Query: 222 SWVLHSTGGLALLNGSPQFLSCSLLHW*HLM 130
           +W L +   L ++ G   FL    LHW   M
Sbjct: 792 AWSLFTLAILVMMEGLSAFLHTLRLHWVEFM 822


>AJ439060-15|CAD27766.1|   56|Anopheles gambiae putative ribosomal
           protein protein.
          Length = 56

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -2

Query: 371 NRWG*HPSKYGQQFR 327
           N W  HP KYGQ  R
Sbjct: 5   NLWYSHPRKYGQGSR 19


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 620,240
Number of Sequences: 2352
Number of extensions: 12212
Number of successful extensions: 59
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57188952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)