Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10a01
         (650 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4KLQ3 Cluster: LOC100093620 protein; n=2; Xenopus|Rep:...    36   1.1  

>UniRef50_Q4KLQ3 Cluster: LOC100093620 protein; n=2; Xenopus|Rep:
           LOC100093620 protein - Xenopus laevis (African clawed
           frog)
          Length = 642

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
 Frame = -3

Query: 243 MKPIDSNNHTAIMGRELICPSKATKT--PVNSNQSHYCTMSVPANSN 109
           M P+D N HTA MG+E + P K      P +S++S    +   AN N
Sbjct: 385 MHPVDGNLHTAAMGKEPVQPKKVQPVVQPQSSSESSAFEVETDANEN 431


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 624,621,106
Number of Sequences: 1657284
Number of extensions: 12209708
Number of successful extensions: 21226
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 20683
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21225
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)