Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0997
         (800 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0191 + 1478267-1478929,1480579-1480789,1482625-1482925,148...    29   3.3  
04_03_0811 - 19909128-19912214                                         29   5.7  

>06_01_0191 +
           1478267-1478929,1480579-1480789,1482625-1482925,
           1483217-1483612,1483993-1484070,1484166-1484373
          Length = 618

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -1

Query: 185 MLHCNECIIIWSKYYRYY 132
           M HC+ C+I WSKY   Y
Sbjct: 278 MAHCSRCLIPWSKYNGLY 295


>04_03_0811 - 19909128-19912214
          Length = 1028

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 19/60 (31%), Positives = 28/60 (46%)
 Frame = +2

Query: 71  FNKIILKLFPRYKIKSLCQWDNIGNILTI*LYIHYNVTFDFIIIIHKFLNI*KCDYYSKM 250
           FN  +L L     +KSLC + N GN L+     H N    ++ +    +NI  CD +  M
Sbjct: 371 FNLRLLSLRGCTNLKSLCNFSNRGNTLSPNDKCHVN-NLLYLDLTQLNINIFPCDLFQDM 429


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,442,536
Number of Sequences: 37544
Number of extensions: 254186
Number of successful extensions: 327
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 322
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 327
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2174172540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)