Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0994
         (680 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DC0A8F Cluster: UPI0000DC0A8F related cluster; n...    35   2.1  
UniRef50_UPI000069F857 Cluster: UPI000069F857 related cluster; n...    33   4.9  
UniRef50_Q9QJ59 Cluster: B4; n=1; Human herpesvirus 6B|Rep: B4 -...    33   4.9  
UniRef50_Q581P0 Cluster: Putative uncharacterized protein; n=1; ...    33   4.9  
UniRef50_Q235H0 Cluster: Putative uncharacterized protein; n=2; ...    33   6.4  
UniRef50_Q6ZVA9 Cluster: CDNA FLJ42813 fis, clone BRCAN2012355; ...    33   8.5  

>UniRef50_UPI0000DC0A8F Cluster: UPI0000DC0A8F related cluster; n=4;
           Tetrapoda|Rep: UPI0000DC0A8F UniRef100 entry - Rattus
           norvegicus
          Length = 131

 Score = 34.7 bits (76), Expect = 2.1
 Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
 Frame = +1

Query: 166 YIFFLYCIIKNIYLIISCSL*NIITSNVYVCI---LYYSLIVFLCLSLYGCTYIHCKSVF 336
           Y+     I  +IYL I  S+   I  ++YVC+   +Y S+ + + LS+Y C Y+   +  
Sbjct: 44  YVSMYVSIYLSIYLSIYLSIYLSIYVSIYVCMYVSIYLSIYLSIYLSIYLCMYVCMYACM 103

Query: 337 YV 342
           YV
Sbjct: 104 YV 105


>UniRef50_UPI000069F857 Cluster: UPI000069F857 related cluster;
           n=23; Xenopus tropicalis|Rep: UPI000069F857 UniRef100
           entry - Xenopus tropicalis
          Length = 886

 Score = 33.5 bits (73), Expect = 4.9
 Identities = 16/44 (36%), Positives = 21/44 (47%)
 Frame = -3

Query: 210 YKINIFNYTVQKKNILCNVSSNFSLFKNCIIWLEPFKKGLCYQI 79
           Y +  F YT +  N +  V+    L KNC+    PFK G C  I
Sbjct: 417 YDVYNFKYTYKVHNAVFAVAHALHLMKNCVPGKGPFKNGSCADI 460


>UniRef50_Q9QJ59 Cluster: B4; n=1; Human herpesvirus 6B|Rep: B4 -
           Human herpesvirus 6B
          Length = 193

 Score = 33.5 bits (73), Expect = 4.9
 Identities = 14/59 (23%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
 Frame = +1

Query: 169 IFFLYCIIKNIYLIISCSL*NIITSNVYVCI---LYYSLIVFLCLSLYGCTYIHCKSVF 336
           +FF  CI   +Y  +   L       +++C+   +Y+ + VF C+  + C +  C   F
Sbjct: 3   VFFCVCIFLCVYFFVCIFLCVFFCVCIFLCVFFCVYFFVCVFFCVCFFVCVFFVCVYAF 61


>UniRef50_Q581P0 Cluster: Putative uncharacterized protein; n=1;
           Trypanosoma brucei|Rep: Putative uncharacterized protein
           - Trypanosoma brucei
          Length = 139

 Score = 33.5 bits (73), Expect = 4.9
 Identities = 15/53 (28%), Positives = 29/53 (54%)
 Frame = +3

Query: 165 IYFFFVLYN*KYLSYNIMFIIKYNNK*CLCMYIIL*SHSIFMFIFIWLYLHTL 323
           +YFFF ++   YL   I FI  + +   +C+++     SI  F+F++ +L  +
Sbjct: 18  VYFFFTMFGLFYLMVYIYFIFLFPSVVFVCLFVFGVVVSICTFLFVFCFLDVI 70


>UniRef50_Q235H0 Cluster: Putative uncharacterized protein; n=2;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 2526

 Score = 33.1 bits (72), Expect = 6.4
 Identities = 20/62 (32%), Positives = 33/62 (53%)
 Frame = -3

Query: 210 YKINIFNYTVQKKNILCNVSSNFSLFKNCIIWLEPFKKGLCYQIELYQIKINKTCSFLPV 31
           Y++NI N +V++ NI  N+ + F  F N ++   P      YQI ++ I  N    F P+
Sbjct: 30  YELNIQNNSVRQINIPFNIGNIFP-FNNFLVLTNP------YQIVIFDILSNNVVLFKPI 82

Query: 30  NK 25
           N+
Sbjct: 83  NQ 84


>UniRef50_Q6ZVA9 Cluster: CDNA FLJ42813 fis, clone BRCAN2012355;
           n=1; Homo sapiens|Rep: CDNA FLJ42813 fis, clone
           BRCAN2012355 - Homo sapiens (Human)
          Length = 180

 Score = 32.7 bits (71), Expect = 8.5
 Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
 Frame = +1

Query: 166 YIFFLYCIIKNIYLIISCSL*NIITSNVYVCI-LY-YSLIVFLCLSLYGCTYIH-C--KS 330
           Y +    I  +I++ +  ++   I   +Y CI +Y Y   +++C   Y CTYIH C   S
Sbjct: 96  YTYIYVYIYTHIHICVHINMYVSIYVYIYTCIQIYIYMYTLYVCTYTYMCTYIHICIHTS 155

Query: 331 VFYV 342
           + YV
Sbjct: 156 IIYV 159


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 571,381,299
Number of Sequences: 1657284
Number of extensions: 10627349
Number of successful extensions: 27136
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 25651
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27079
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52892566912
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)