Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0994
         (680 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1584 - 38441654-38442847                                         29   4.5  
05_03_0658 + 16711117-16712337                                         28   7.9  

>01_06_1584 - 38441654-38442847
          Length = 397

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 15/56 (26%), Positives = 29/56 (51%)
 Frame = +2

Query: 437 VKQKIYGSIFVQRGVCSFFFNSLMYKSKKKTLILDCPVPKYNLSKQLGPTKQKRWN 604
           +K+K++ SI +Q+GVC  +  S +  ++         +   +L K+   T  +RWN
Sbjct: 79  LKRKLFSSILLQKGVCDAYILSNLGFAEPSIFFAFAFLLHGSLQKRELGTLNQRWN 134


>05_03_0658 + 16711117-16712337
          Length = 406

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 126 CIIWLEPFKKGLCYQIELYQIKIN 55
           C +W E  +KG+C  +  Y + IN
Sbjct: 294 CAVWEEMHRKGICPDVNSYTVFIN 317


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,158,459
Number of Sequences: 37544
Number of extensions: 243223
Number of successful extensions: 477
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 471
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 477
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1721314888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)