Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0994
         (680 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U31351-1|AAB97618.1|  810|Drosophila melanogaster protein ( Dros...    29   7.8  
BT023046-1|AAY55462.1|  217|Drosophila melanogaster IP08576p pro...    29   7.8  
AF044287-1|AAC01743.1|  810|Drosophila melanogaster delta adapti...    29   7.8  
AE014134-1068|AAF52358.1|  216|Drosophila melanogaster CG9486-PA...    29   7.8  

>U31351-1|AAB97618.1|  810|Drosophila melanogaster protein (
           Drosophila melanogastergarnet mRNA, complete cds. ).
          Length = 810

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = +1

Query: 256 CILYYSLIVFLCLSLYGC-TYIHCKSVFYV 342
           C L ++++V  CLSLY C   IH  + F++
Sbjct: 134 CQLLFAIVVVQCLSLYRCLLLIHVPTFFFL 163


>BT023046-1|AAY55462.1|  217|Drosophila melanogaster IP08576p
           protein.
          Length = 217

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 11/37 (29%), Positives = 22/37 (59%)
 Frame = +1

Query: 448 NLWKHFRPKRCMQLFF*FIDVQIEKKNINLRLSSSQI 558
           N++KH+  +R + L+   +DV I ++ +  RL  + I
Sbjct: 116 NIFKHYGVERALYLYMLGVDVSIRRQRVGTRLVEATI 152


>AF044287-1|AAC01743.1|  810|Drosophila melanogaster delta adaptin
           subunit of AP-3 protein.
          Length = 810

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = +1

Query: 256 CILYYSLIVFLCLSLYGC-TYIHCKSVFYV 342
           C L ++++V  CLSLY C   IH  + F++
Sbjct: 134 CQLLFAIVVVQCLSLYRCLLLIHVPTFFFL 163


>AE014134-1068|AAF52358.1|  216|Drosophila melanogaster CG9486-PA
           protein.
          Length = 216

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 11/37 (29%), Positives = 22/37 (59%)
 Frame = +1

Query: 448 NLWKHFRPKRCMQLFF*FIDVQIEKKNINLRLSSSQI 558
           N++KH+  +R + L+   +DV I ++ +  RL  + I
Sbjct: 115 NIFKHYGVERALYLYMLGVDVSIRRQRVGTRLVEATI 151


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,911,872
Number of Sequences: 53049
Number of extensions: 458085
Number of successful extensions: 745
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 745
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2971922400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)