Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0994
         (680 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL031627-13|CAA20964.1|  304|Caenorhabditis elegans Hypothetical...    29   4.1  
Z83239-8|CAH60787.1|  311|Caenorhabditis elegans Hypothetical pr...    27   9.4  
Z81111-4|CAB03264.1|  415|Caenorhabditis elegans Hypothetical pr...    27   9.4  
AF068710-3|ABO16459.1|  189|Caenorhabditis elegans Hypothetical ...    27   9.4  

>AL031627-13|CAA20964.1|  304|Caenorhabditis elegans Hypothetical
           protein Y102A5C.23 protein.
          Length = 304

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = +1

Query: 235 ITSNVY-VCILYYSLIVFLCLSLYGCTYIHCKSVFYVT 345
           IT + Y + I+YY + V  C+S++ C Y    S+  +T
Sbjct: 63  ITKHFYHMVIIYYLIFVLTCISVFFCFYSLFSSLCIIT 100


>Z83239-8|CAH60787.1|  311|Caenorhabditis elegans Hypothetical
           protein T09F5.16 protein.
          Length = 311

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 10/34 (29%), Positives = 20/34 (58%)
 Frame = +1

Query: 202 YLIISCSL*NIITSNVYVCILYYSLIVFLCLSLY 303
           YL IS    N++  N+Y+C +  S+++ +   +Y
Sbjct: 128 YLNISVEALNVVVRNLYICFIIKSVMLIILPYIY 161


>Z81111-4|CAB03264.1|  415|Caenorhabditis elegans Hypothetical
           protein T01G5.4 protein.
          Length = 415

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -1

Query: 581 ALIVLRDYIWELDNLRLMFFFSICTSMN 498
           ALI+   YIW +  + L FF  + TS+N
Sbjct: 201 ALIISNFYIWFISTVCLAFFVLVFTSIN 228


>AF068710-3|ABO16459.1|  189|Caenorhabditis elegans Hypothetical
           protein T06A1.4 protein.
          Length = 189

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +2

Query: 89  QSPFLNGSSHIIQFLNKEKFELTLHNIFFFC 181
           + PF+   SHI+Q    EK E+     F FC
Sbjct: 149 EEPFIQMVSHILQDRFNEKAEMLYRKFFQFC 179


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,028,935
Number of Sequences: 27780
Number of extensions: 283871
Number of successful extensions: 852
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 839
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 851
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)