Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0992
(675 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_1037 - 22477358-22478752 31 1.1
05_05_0010 - 21496089-21496487 30 1.5
12_02_0953 - 24736642-24736673,24737104-24737188,24737267-247373... 29 2.6
10_06_0038 - 9958520-9958763,9959240-9959394 29 2.6
08_02_0546 - 18474217-18475133,18475207-18475396,18475870-184763... 29 2.6
06_03_0617 + 22773981-22774216,22774715-22774880 29 3.4
05_03_0039 - 7621613-7622695 29 3.4
05_07_0339 - 29375424-29377166,29377272-29377441,29377888-293780... 29 4.5
01_01_0572 - 4244714-4245311,4245694-4245736,4246172-4246283,424... 29 4.5
05_05_0230 - 23476919-23477372,23477656-23477695,23478578-234787... 28 5.9
02_02_0503 + 11008475-11008793,11009983-11010140,11011863-110121... 28 5.9
01_06_1167 - 35062766-35062870,35063165-35063228,35063647-350637... 28 5.9
10_08_0801 + 20670795-20671730 28 7.8
09_06_0245 - 21833622-21833901,21833988-21834059,21834152-218342... 28 7.8
06_03_1348 - 29497084-29497384,29497464-29497634,29497717-294985... 28 7.8
06_01_1148 + 9629630-9629759,9629848-9630581,9630660-9631121,963... 28 7.8
06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,805... 28 7.8
05_07_0218 + 28470325-28470454,28470543-28471276,28471355-284718... 28 7.8
05_02_0043 + 5964749-5966406,5966725-5966791,5967174-5967329,596... 28 7.8
02_05_0268 - 27302734-27303034,27303114-27303284,27303367-273041... 28 7.8
02_02_0307 - 8809724-8811589,8811681-8811762,8812130-8812242,881... 28 7.8
01_06_1803 + 39985439-39985701,39986582-39987971 28 7.8
01_02_0132 + 11444480-11444609,11444698-11445131,11445210-114454... 28 7.8
>10_08_1037 - 22477358-22478752
Length = 464
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/64 (31%), Positives = 28/64 (43%)
Frame = +1
Query: 85 EDLLELRSQAGSLAESVESLGPAPKNKAPENPHQQHASPTKTKPNHSFLPKPSELREMNF 264
E+ L + G+ A + + A +AP PH H P P+ LP PS +N
Sbjct: 333 ENSLFSATPPGAAAAAAAAAAAATGQQAP--PHHPHPPPPPPVPSPGILPSPSGF--LNL 388
Query: 265 WSPT 276
SPT
Sbjct: 389 LSPT 392
>05_05_0010 - 21496089-21496487
Length = 132
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +3
Query: 108 ASGQLGGVSGEPRSGSEEQSTRESPPAARVSNENKTES 221
+SG +GG S PR S S+ SPP++ VS+E E+
Sbjct: 29 SSGVVGG-SSSPRRLSSSSSSTASPPSSCVSSEGSPEA 65
>12_02_0953 - 24736642-24736673,24737104-24737188,24737267-24737386,
24737484-24737549,24737629-24737799,24737901-24737999,
24738075-24738186,24738282-24738343,24738412-24738483,
24738583-24738681,24738764-24738997,24739104-24739178,
24739299-24739386,24739478-24739638,24739734-24739841,
24739934-24741922,24742007-24742279,24742957-24743295,
24743449-24745038,24745166-24745241,24745333-24745412,
24745614-24745679,24745761-24745830,24745899-24746134,
24746149-24746319,24746915-24747097,24747176-24747241,
24747326-24747389,24747472-24747530,24747612-24747699,
24747799-24747891,24747956-24748116,24748215-24748307,
24748405-24748518,24748654-24748773,24748852-24748935,
24749016-24749171,24749518-24750154,24752874-24752929
Length = 2815
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = +1
Query: 46 KKELATSTSTLAEEDLLELRSQAGSLAESVESL 144
K EL + L+EE+L LRS GSL S+ESL
Sbjct: 1938 KDELMENLHVLSEENL-NLRSVVGSLESSIESL 1969
>10_06_0038 - 9958520-9958763,9959240-9959394
Length = 132
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = -2
Query: 257 ISRNSDGFGRKE*FGFVFVGDACCWWGFSGALFFGAGPRLSTDSAKLPACD 105
+SR++ F R V G C WW S ++ G +L D+ + CD
Sbjct: 78 VSRHATRFPRWLGGAMVLSGGVCWWWSMSASV--GGPQQLHDDNVRYGGCD 126
>08_02_0546 - 18474217-18475133,18475207-18475396,18475870-18476313,
18476629-18477495,18478858-18479367
Length = 975
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +1
Query: 55 LATSTSTLAEEDLLELRSQAGSLAESVESLGPAPKNKAPENPH 183
L T T TL E + GS A+S + P P + +P NP+
Sbjct: 905 LRTDTGTLIERFKQAISESCGSTAKSGFPMPPVPAHWSPSNPN 947
>06_03_0617 + 22773981-22774216,22774715-22774880
Length = 133
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = -3
Query: 157 SEPDRGSPLTPPSCPLAIS 101
S P G PL PPS PLA+S
Sbjct: 2 SMPSAGPPLLPPSLPLAVS 20
>05_03_0039 - 7621613-7622695
Length = 360
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = +1
Query: 100 LRSQAGSLAESVESLGPAPKNKAPENPHQQHASPTKTKPNHSFLPKP 240
+ Q ++ E L P PK K PH +H S + KP PKP
Sbjct: 42 MSKQGRAMYEKPPELEPKPKPK--PKPHPKHESKPEPKPEPKPEPKP 86
>05_07_0339 - 29375424-29377166,29377272-29377441,29377888-29378030,
29378363-29378478,29378576-29378814,29378909-29379110,
29379212-29379430,29379657-29379724,29379806-29379812,
29380404-29380616
Length = 1039
Score = 28.7 bits (61), Expect = 4.5
Identities = 20/67 (29%), Positives = 29/67 (43%)
Frame = +1
Query: 7 SNRSWLSIALLGFKKELATSTSTLAEEDLLELRSQAGSLAESVESLGPAPKNKAPENPHQ 186
+ RSWL L K + E + R++ GS + S + K K PEN H
Sbjct: 961 TERSWLG-QLREMAKASFSKEGQGGEAEASGSRAKGGSRSMSSVASSSDSKAKGPENSHS 1019
Query: 187 QHASPTK 207
Q +S +K
Sbjct: 1020 QWSSKSK 1026
>01_01_0572 -
4244714-4245311,4245694-4245736,4246172-4246283,
4246462-4246551,4246625-4246787,4246909-4247015,
4247149-4247230,4247314-4247351,4247434-4247542,
4248031-4248095,4248358-4248468,4248610-4248747
Length = 551
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 157 SEPDRGSPLTPPSCPLAISVPTSLLQLTWKL 65
+ P SP+ PP+ P A P LL+ +W+L
Sbjct: 8 ARPPASSPVDPPASPPAPEDPCVLLRRSWEL 38
>05_05_0230 -
23476919-23477372,23477656-23477695,23478578-23478700,
23479114-23479151,23479289-23479674,23479875-23481053,
23481805-23481928,23482733-23482779
Length = 796
Score = 28.3 bits (60), Expect = 5.9
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +1
Query: 37 LGFKKELATSTSTLAEEDLLELRSQAGSLAESVESLGPAPKNKAPENPHQQHASPTKTKP 216
+G +++ TS++ R+ A S A S P P+ +AP P P +T P
Sbjct: 281 VGRSSSISSLTSSINRPAANGGRNSAPSSAPSSRPSSPGPRPRAPVRPLDIPDFPNETPP 340
Query: 217 N 219
N
Sbjct: 341 N 341
>02_02_0503 +
11008475-11008793,11009983-11010140,11011863-11012102,
11013502-11013757,11013846-11014057,11014413-11014453,
11014531-11014567
Length = 420
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -2
Query: 218 FGFVFVGDACCWWGFSGALFFGAGPRLSTDSA 123
+GF+ DACC G G LF P+++ A
Sbjct: 324 YGFLTTTDACCGLGKYGGLFMCVLPQMACSDA 355
>01_06_1167 -
35062766-35062870,35063165-35063228,35063647-35063738,
35064137-35064205,35064322-35064412,35064509-35064732,
35065064-35065180,35065583-35065651,35066172-35066237,
35066335-35066505,35066581-35066661,35067620-35067700
Length = 409
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +1
Query: 103 RSQAGSLAESVESLGPAPKNKAPENPHQQHASPTKTKPN 219
+ G +V+S AP+NKAPEN A+PT K N
Sbjct: 177 QKNVGKSDANVDSKKAAPENKAPEN----KANPTPAKNN 211
>10_08_0801 + 20670795-20671730
Length = 311
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +1
Query: 58 ATSTSTLAEEDLLELRSQAGSLAESVESLGPAPKNKAPENPHQQHASP 201
A + S++A + + AES S P+P+ P +P + ASP
Sbjct: 194 AAAASSVAAAAAAVFAGVSSASAESAASAAPSPRTPTPYSPARTPASP 241
>09_06_0245 -
21833622-21833901,21833988-21834059,21834152-21834231,
21834366-21835109,21835212-21835547
Length = 503
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +3
Query: 93 VGTEIASGQLGGVSGEPRSGSEEQSTRESPPAARVSNENKTESFLPP 233
VG A+ S E R+ PPAA S++ K ++F+PP
Sbjct: 150 VGDGGAASAAAPASSSSMEEWSEIDLRDPPPAAAASDKPKHKAFVPP 196
>06_03_1348 -
29497084-29497384,29497464-29497634,29497717-29498549,
29498631-29499092,29499171-29499904,29499993-29500122
Length = 876
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 178 DSRVLCSSEPDRGSPLTPPSCPLAISVP 95
D V + P R + LTPP C L+I P
Sbjct: 526 DIVVKMTPHPSRPTELTPPKCKLSIEAP 553
>06_01_1148 +
9629630-9629759,9629848-9630581,9630660-9631121,
9631203-9632035,9632118-9632288,9632368-9632668
Length = 876
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 178 DSRVLCSSEPDRGSPLTPPSCPLAISVP 95
D V + P R + LTPP C L+I P
Sbjct: 526 DIVVKMTPRPSRPTELTPPKCKLSIEAP 553
>06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,
8057595-8058314,8058404-8058603,8058988-8059172,
8059287-8059354,8059432-8060246,8060502-8060599,
8060702-8060887,8061358-8061538,8061651-8061812,
8061894-8061937,8062059-8062115,8062409-8062505,
8062614-8062786,8062868-8063081,8063270-8063395,
8064072-8064188,8064459-8064566,8064729-8064898,
8065049-8065127,8065211-8065285,8065845-8065942,
8066030-8066137,8066238-8066295,8066527-8066631,
8067461-8069516,8069804-8070697,8070896-8071852,
8072022-8072075,8072157-8072222,8072294-8073472,
8073868-8075598,8075764-8075829,8076763-8077788,
8077893-8078041
Length = 4264
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = +1
Query: 79 AEEDLLELRSQAGSLAESVESLGPAPKNKAPENPHQQHASPTKTKPN 219
++ED +E+ Q ++ S P A N +HA+PT+ N
Sbjct: 3555 SKEDNMEVEDQFDGISRGPSSFSPDTLESAELNQAAEHAAPTEDDGN 3601
>05_07_0218 +
28470325-28470454,28470543-28471276,28471355-28471816,
28471898-28472730,28472813-28472983,28473063-28473180
Length = 815
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 178 DSRVLCSSEPDRGSPLTPPSCPLAISVP 95
D V + P R + LTPP C L+I P
Sbjct: 526 DIVVKMTPRPSRPTELTPPKCKLSIEAP 553
>05_02_0043 +
5964749-5966406,5966725-5966791,5967174-5967329,
5967782-5967865,5968020-5968073
Length = 672
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/50 (24%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = -3
Query: 430 LNQIRTTALPFALLPRDRNP---YTVSTFSTTKSYTGEYLEQTQRVSLWY 290
+N+ + +A+ L DR+ Y++S + +G+Y + +Q++ WY
Sbjct: 187 VNKGKQSAMKNTQLDHDRHSMEEYSISDIELSSEISGQYQDPSQQIGQWY 236
>02_05_0268 -
27302734-27303034,27303114-27303284,27303367-27304199,
27304281-27304742,27304821-27305554,27305643-27305772
Length = 876
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 178 DSRVLCSSEPDRGSPLTPPSCPLAISVP 95
D V + P R + LTPP C L+I P
Sbjct: 526 DIVVKMTPRPSRPTELTPPKCKLSIEAP 553
>02_02_0307 - 8809724-8811589,8811681-8811762,8812130-8812242,
8812361-8812492,8812681-8812864,8813002-8813135,
8813552-8813656,8813738-8813839,8813930-8814022,
8814136-8814456,8814595-8814696,8814791-8814853,
8815213-8815708,8815964-8816124,8816213-8816743,
8817077-8817118,8817203-8817334,8817639-8817703,
8817858-8818169,8818262-8818334,8818425-8818517,
8819440-8819501,8819740-8819809
Length = 1777
Score = 27.9 bits (59), Expect = 7.8
Identities = 20/66 (30%), Positives = 29/66 (43%)
Frame = +1
Query: 49 KELATSTSTLAEEDLLELRSQAGSLAESVESLGPAPKNKAPENPHQQHASPTKTKPNHSF 228
K S+ L E + R + AE V +P N P +P+ ASP T+ +
Sbjct: 1613 KSALPSSEGLTEANTFATRVMNPNAAEFVPGQSRSP-NGNPASPNGPLASPGGTEASPHG 1671
Query: 229 LPKPSE 246
LP PS+
Sbjct: 1672 LPSPSD 1677
>01_06_1803 + 39985439-39985701,39986582-39987971
Length = 550
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +2
Query: 107 RKRAAWRSQWRASVRLRRTKHPRIPTSSTRLQRKQNRIIPSSRNH 241
R++ RSQ + V RR PR+ T RKQ+ ++P ++H
Sbjct: 459 REKHVGRSQ--SCVTYRRWSSPRMSTIQNGTLRKQHTLVPVRKSH 501
>01_02_0132 +
11444480-11444609,11444698-11445131,11445210-11445431,
11445510-11445971,11446053-11446885,11446968-11447138,
11447218-11447518
Length = 850
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 178 DSRVLCSSEPDRGSPLTPPSCPLAISVP 95
D V + P R + LTPP C L+I P
Sbjct: 500 DIVVKMTPRPSRPTELTPPKCKLSIEAP 527
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,699,983
Number of Sequences: 37544
Number of extensions: 374307
Number of successful extensions: 1517
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1399
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1516
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1714968940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -