Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0992
         (675 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      28   0.094
AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family p...    23   2.7  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   6.1  

>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 27.9 bits (59), Expect = 0.094
 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = +3

Query: 102 EIASGQLGGVSGEPRSGSEE-QSTRESPPAARVSNENKTES 221
           E+  G  G  +G     S+   +  + PPA+  SNE++ ES
Sbjct: 246 ELTGGNSGNAAGNNEDSSDSGAAASDRPPASASSNEHEAES 286


>AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family
           protein protein.
          Length = 166

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +3

Query: 105 IASGQLGGVSGEPRSGSEEQSTRESPP 185
           I SGQL  +S +     EE +    PP
Sbjct: 66  IRSGQLNIISSDHDDSDEEYAANSQPP 92


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = +1

Query: 52  ELATSTSTLAEEDLLELRSQAGSLAESVESLGPAPKNKAPENPHQQHAS 198
           E A     L+ EDL+   +  GS  +S+ +L    +    E P  +HA+
Sbjct: 711 EKALLKPLLSLEDLVRFSTLEGSGGDSLRTLLQRGQETGAEWPGLEHAN 759


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,704
Number of Sequences: 438
Number of extensions: 4258
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20464920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)