Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0991
         (743 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0449 + 23741072-23741506,23741599-23741783,23742172-23742307     29   3.9  
06_01_0429 - 3056302-3056570,3056681-3056951,3057055-3057206,305...    28   9.0  

>11_06_0449 + 23741072-23741506,23741599-23741783,23742172-23742307
          Length = 251

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 12/23 (52%), Positives = 16/23 (69%), Gaps = 3/23 (13%)
 Frame = +1

Query: 475 KLNIYVFTG---NTVLQFLNENW 534
           KL +YVF G   N+V+ F+N NW
Sbjct: 146 KLQVYVFCGPLINSVINFINPNW 168


>06_01_0429 -
           3056302-3056570,3056681-3056951,3057055-3057206,
           3057419-3057631,3057791-3057959
          Length = 357

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 18/46 (39%), Positives = 25/46 (54%)
 Frame = -3

Query: 159 ISSKVSV*LQRLPHPSNRNALLFHGRNRRGGGTYPCGLTRGPTTSN 22
           + SK+S  +Q L +   RN ++F   N    G YP  LT+ P TSN
Sbjct: 169 VVSKISSTVQELYNIGARNIMVF---NMAPIGCYPAFLTKLPHTSN 211


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,997,638
Number of Sequences: 37544
Number of extensions: 384535
Number of successful extensions: 743
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 743
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1968901276
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)