Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0989
(694 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82077-8|CAB63329.1| 459|Caenorhabditis elegans Hypothetical pr... 72 5e-13
AL117200-14|CAJ85779.1| 465|Caenorhabditis elegans Hypothetical... 56 3e-08
AL117200-12|CAB60583.1| 461|Caenorhabditis elegans Hypothetical... 56 3e-08
AL117200-11|CAD54172.1| 530|Caenorhabditis elegans Hypothetical... 56 3e-08
U68255-1|AAB16970.1| 70|Caenorhabditis elegans rab7-like protein. 33 0.19
AL032654-6|CAB54465.1| 467|Caenorhabditis elegans Hypothetical ... 29 3.2
Z82078-7|CAB04947.3| 801|Caenorhabditis elegans Hypothetical pr... 28 5.5
AF497514-1|AAM33381.1| 801|Caenorhabditis elegans heavy metal t... 28 5.5
AF497513-1|AAM33380.1| 801|Caenorhabditis elegans heavy metal t... 28 5.5
AF490977-1|AAQ06435.1| 801|Caenorhabditis elegans ABC6 protein ... 28 5.5
AC024202-4|AAF36036.1| 406|Caenorhabditis elegans Hypothetical ... 28 7.3
U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein. 27 9.6
AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical... 27 9.6
>Z82077-8|CAB63329.1| 459|Caenorhabditis elegans Hypothetical
protein W09C5.2 protein.
Length = 459
Score = 71.7 bits (168), Expect = 5e-13
Identities = 32/47 (68%), Positives = 38/47 (80%)
Frame = +1
Query: 526 DYIGFATLPEQVHRKSVKRGFDFTLMVVGESGLGKSTLINSLFLGDL 666
+Y GFA P QV R++VK GFDFTLMVVG SGLGKST IN+LFL ++
Sbjct: 26 NYWGFANFPNQVFRRAVKNGFDFTLMVVGRSGLGKSTFINTLFLAEI 72
>AL117200-14|CAJ85779.1| 465|Caenorhabditis elegans Hypothetical
protein Y50E8A.4c protein.
Length = 465
Score = 55.6 bits (128), Expect = 3e-08
Identities = 24/42 (57%), Positives = 33/42 (78%)
Frame = +1
Query: 529 YIGFATLPEQVHRKSVKRGFDFTLMVVGESGLGKSTLINSLF 654
++GF +LP Q+ +K+V+ GF F LM VGE+G GK+TLI SLF
Sbjct: 79 HVGFDSLPHQLVKKAVEAGFQFNLMCVGETGTGKTTLIESLF 120
>AL117200-12|CAB60583.1| 461|Caenorhabditis elegans Hypothetical
protein Y50E8A.4b protein.
Length = 461
Score = 55.6 bits (128), Expect = 3e-08
Identities = 24/42 (57%), Positives = 33/42 (78%)
Frame = +1
Query: 529 YIGFATLPEQVHRKSVKRGFDFTLMVVGESGLGKSTLINSLF 654
++GF +LP Q+ +K+V+ GF F LM VGE+G GK+TLI SLF
Sbjct: 79 HVGFDSLPHQLVKKAVEAGFQFNLMCVGETGTGKTTLIESLF 120
>AL117200-11|CAD54172.1| 530|Caenorhabditis elegans Hypothetical
protein Y50E8A.4a protein.
Length = 530
Score = 55.6 bits (128), Expect = 3e-08
Identities = 24/42 (57%), Positives = 33/42 (78%)
Frame = +1
Query: 529 YIGFATLPEQVHRKSVKRGFDFTLMVVGESGLGKSTLINSLF 654
++GF +LP Q+ +K+V+ GF F LM VGE+G GK+TLI SLF
Sbjct: 148 HVGFDSLPHQLVKKAVEAGFQFNLMCVGETGTGKTTLIESLF 189
>U68255-1|AAB16970.1| 70|Caenorhabditis elegans rab7-like protein.
Length = 70
Score = 33.1 bits (72), Expect = 0.19
Identities = 14/32 (43%), Positives = 25/32 (78%), Gaps = 3/32 (9%)
Frame = +1
Query: 598 LMVVGESGLGKSTLINSLFLGDL---YKNRKF 684
++++G+SG+GK++L+N +GDL Y NR+F
Sbjct: 12 VIILGDSGVGKTSLMNQYEIGDLMNQYVNRRF 43
>AL032654-6|CAB54465.1| 467|Caenorhabditis elegans Hypothetical
protein Y52B11A.4 protein.
Length = 467
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +1
Query: 592 FTLMVVGESGLGKSTLINSLFLGDLYKN 675
+ + VVG++G GKS+LI+ L + YKN
Sbjct: 238 YKIYVVGDTGTGKSSLISQLITSE-YKN 264
>Z82078-7|CAB04947.3| 801|Caenorhabditis elegans Hypothetical
protein W09D6.6 protein.
Length = 801
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +1
Query: 595 TLMVVGESGLGKSTLINSLF 654
T+ +VG SG GKSTLI LF
Sbjct: 578 TVALVGSSGSGKSTLIRLLF 597
>AF497514-1|AAM33381.1| 801|Caenorhabditis elegans heavy metal
tolerance factor 1 protein.
Length = 801
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +1
Query: 595 TLMVVGESGLGKSTLINSLF 654
T+ +VG SG GKSTLI LF
Sbjct: 578 TVALVGSSGSGKSTLIRLLF 597
>AF497513-1|AAM33380.1| 801|Caenorhabditis elegans heavy metal
tolerance factor 1 protein.
Length = 801
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +1
Query: 595 TLMVVGESGLGKSTLINSLF 654
T+ +VG SG GKSTLI LF
Sbjct: 578 TVALVGSSGSGKSTLIRLLF 597
>AF490977-1|AAQ06435.1| 801|Caenorhabditis elegans ABC6 protein
protein.
Length = 801
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +1
Query: 595 TLMVVGESGLGKSTLINSLF 654
T+ +VG SG GKSTLI LF
Sbjct: 578 TVALVGSSGSGKSTLIRLLF 597
>AC024202-4|AAF36036.1| 406|Caenorhabditis elegans Hypothetical
protein Y71H2B.7 protein.
Length = 406
Score = 27.9 bits (59), Expect = 7.3
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +1
Query: 544 TLPEQVHRKSVKRGFDFTLMVVGESGLGKSTLINSLFLGDLYKNRKFQMF 693
T+ Q +K+ K G ++G G GK+T++ L + K + +QM+
Sbjct: 17 TMNGQNKKKTKKEGDIIHFFMLGIEGAGKTTIVRQLKCLCIQKPQSYQMY 66
>U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein.
Length = 66
Score = 27.5 bits (58), Expect = 9.6
Identities = 9/17 (52%), Positives = 16/17 (94%)
Frame = +1
Query: 592 FTLMVVGESGLGKSTLI 642
F L+++G+SG+GKS+L+
Sbjct: 11 FKLLIIGDSGVGKSSLL 27
>AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical
protein Y47D3A.25 protein.
Length = 209
Score = 27.5 bits (58), Expect = 9.6
Identities = 9/17 (52%), Positives = 16/17 (94%)
Frame = +1
Query: 592 FTLMVVGESGLGKSTLI 642
F L+++G+SG+GKS+L+
Sbjct: 11 FKLLIIGDSGVGKSSLL 27
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,886,376
Number of Sequences: 27780
Number of extensions: 259444
Number of successful extensions: 703
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 703
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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