Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0989
(694 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g16640.1 68415.m01910 chloroplast outer membrane protein, put... 35 0.045
At3g16620.1 68416.m02124 chloroplast outer membrane protein, put... 34 0.078
At4g15810.1 68417.m02406 chloroplast outer membrane protein, put... 31 0.55
At1g02280.1 68414.m00169 GTP-binding protein (TOC33) identical t... 31 0.96
At5g20300.1 68418.m02416 chloroplast outer membrane protein, put... 30 1.3
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 29 2.2
At1g67440.1 68414.m07676 expressed protein contains Pfam domain ... 29 2.9
At4g01830.1 68417.m00240 multidrug resistance P-glycoprotein, pu... 29 3.9
At1g03160.1 68414.m00293 GTP-binding protein-related contains TI... 29 3.9
At4g02510.1 68417.m00343 chloroplast outer membrane protein, put... 28 5.1
At3g49730.1 68416.m05437 pentatricopeptide (PPR) repeat-containi... 28 5.1
At1g30400.1 68414.m03716 glutathione S-conjugate ABC transporter... 28 5.1
At5g15930.1 68418.m01863 plant adhesion molecule 1 (PAM1) identi... 28 6.8
At3g21250.1 68416.m02685 ABC transporter family protein similar ... 28 6.8
At2g33240.1 68415.m04072 myosin, putative similar to myosin (GI:... 28 6.8
At1g67460.1 68414.m07681 hypothetical protein contains Pfam doma... 28 6.8
At5g45490.1 68418.m05588 disease resistance protein-related cont... 27 8.9
At5g03530.1 68418.m00309 Ras-related GTP-binding family protein ... 27 8.9
At3g60970.1 68416.m06823 ABC transporter family protein ABC tran... 27 8.9
At3g60160.1 68416.m06717 ABC transporter family protein similar ... 27 8.9
At3g54540.1 68416.m06035 ABC transporter family protein similar ... 27 8.9
At3g13100.1 68416.m01640 ABC transporter family protein similar ... 27 8.9
At3g13090.1 68416.m01639 ABC transporter, putative similar to MR... 27 8.9
At3g09910.1 68416.m01181 Ras-related GTP-binding protein, putati... 27 8.9
At2g34660.1 68415.m04258 glutathione S-conjugate ABC transporter... 27 8.9
At1g02530.1 68414.m00204 multidrug resistance P-glycoprotein, pu... 27 8.9
>At2g16640.1 68415.m01910 chloroplast outer membrane protein,
putative similar to chloroplast protein import component
Toc159 [Pisum sativum] GI:8489806, chloroplast outer
envelope protein 86 [Pisum sativum] GI:599958,
GTP-binding protein [Pisum sativum] GI:576509
Length = 1206
Score = 35.1 bits (77), Expect = 0.045
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = +1
Query: 586 FDFTLMVVGESGLGKSTLINSLFLGDLYKNRKFQM 690
F T+MV+G+SG+GKS INS+F + FQM
Sbjct: 573 FSCTIMVLGKSGVGKSATINSIFDEVKFCTDAFQM 607
>At3g16620.1 68416.m02124 chloroplast outer membrane protein,
putative similar to chloroplast protein import component
Toc159 [Pisum sativum] GI:8489806, chloroplast outer
envelope protein 86 [Pisum sativum] GI:599958,
GTP-binding protein [Pisum sativum] GI:576509
Length = 1089
Score = 34.3 bits (75), Expect = 0.078
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +1
Query: 586 FDFTLMVVGESGLGKSTLINSLF 654
F T+MV+G+SG+GKS INS+F
Sbjct: 455 FSCTIMVLGKSGVGKSATINSIF 477
>At4g15810.1 68417.m02406 chloroplast outer membrane protein,
putative similar to chloroplast protein import component
Toc159 [Pisum sativum] GI:8489806, chloroplast outer
envelope protein 86 [Pisum sativum] GI:599958,
GTP-binding protein [Pisum sativum] GI:576509
Length = 898
Score = 31.5 bits (68), Expect = 0.55
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +1
Query: 547 LPEQVHRKSVKRGFDFTLMVVGESGLGKSTLINSLF 654
LPEQ + F ++V+G++G+GKS +NS+F
Sbjct: 597 LPEQEFPADLD--FSINVLVIGKTGVGKSATVNSIF 630
>At1g02280.1 68414.m00169 GTP-binding protein (TOC33) identical to
atToc33 protein (GI:11557973) [Arabidopsis thaliana];
Carboxyl-terminal end highly similar to GTP-binding
protein SP:U43377, location of EST gb|AA394770 and
gb|R30089; identical to cDNA for chloroplast atToc33
protein GI:11557972
Length = 297
Score = 30.7 bits (66), Expect = 0.96
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Frame = +1
Query: 523 RDYIGFATLPEQVHRKSV--------KRGFDFTLMVVGESGLGKSTLINSLFLGDLYKNR 678
R+++GF P K + K T++V+G+ G+GKS+ +NSL + +
Sbjct: 6 REWVGFQQFPAATQEKLIEFFGKLKQKDMNSMTVLVLGKGGVGKSSTVNSLIGEQVVRVS 65
Query: 679 KFQ 687
FQ
Sbjct: 66 PFQ 68
>At5g20300.1 68418.m02416 chloroplast outer membrane protein,
putative similar to chloroplast protein import component
Toc159 [Pisum sativum] GI:8489806, chloroplast outer
envelope protein 86 [Pisum sativum] GI:599958,
GTP-binding protein [Pisum sativum] GI:576509
Length = 793
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +1
Query: 586 FDFTLMVVGESGLGKSTLINSLF 654
F ++V+G++G+GKS INS+F
Sbjct: 165 FSLRILVLGKTGVGKSATINSIF 187
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 533 LDLLHCLNRCTANQ*REVSTSLSWLSENQASENQH 637
LD LHCL + ++ EV T L ++ E+ + +H
Sbjct: 168 LDFLHCLRKQKVDELNEVQTDLQYIKEDINAVERH 202
>At1g67440.1 68414.m07676 expressed protein contains Pfam domain
PF03193: Protein of unknown function, DUF258
Length = 433
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +1
Query: 589 DFTLMVVGESGLGKSTLINSL 651
D T ++VG SG+GKS+LIN L
Sbjct: 205 DQTSVIVGPSGVGKSSLINVL 225
>At4g01830.1 68417.m00240 multidrug resistance P-glycoprotein,
putative similar to multidrug resistant P-glycoprotein
GI:4204793 from [Solanum tuberosum]
Length = 1230
Score = 28.7 bits (61), Expect = 3.9
Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 8/64 (12%)
Frame = +1
Query: 484 ESGKMTMERDRGERD--YIGFA--TLPE-QVHRK---SVKRGFDFTLMVVGESGLGKSTL 639
ESG M +E +G+ + +I F T P+ QV R S++ G T+ +VGESG GKST+
Sbjct: 973 ESG-MVLENVKGDIELCHISFTYQTRPDVQVFRDLCLSIRAGQ--TVALVGESGSGKSTV 1029
Query: 640 INSL 651
I+ L
Sbjct: 1030 ISLL 1033
>At1g03160.1 68414.m00293 GTP-binding protein-related contains
TIGRFAM TIGR00650: GTP-binding conserved hypothetical
protein domain; contains TIGRFAM TIGR00231: small
GTP-binding protein domain; similar to mitofusin 1
precursor (GI:12744896) [Homo sapiens]
Length = 642
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +1
Query: 592 FTLMVVGESGLGKSTLINSLFLGDLY 669
F +++VGE GKST+IN+L LG Y
Sbjct: 350 FLMVIVGEFNSGKSTVINAL-LGKRY 374
>At4g02510.1 68417.m00343 chloroplast outer membrane protein,
putative similar to chloroplast protein import component
Toc159 [Pisum sativum] GI:8489806, chloroplast outer
envelope protein 86 [Pisum sativum] GI:599958,
GTP-binding protein [Pisum sativum] GI:576509
Length = 1503
Score = 28.3 bits (60), Expect = 5.1
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +1
Query: 586 FDFTLMVVGESGLGKSTLINSL 651
F ++V+G++G+GKS INS+
Sbjct: 854 FSLNILVLGKAGVGKSATINSI 875
>At3g49730.1 68416.m05437 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 1184
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +1
Query: 595 TLMVVGESGLGKSTLINSLFLGDLYKNRK 681
T+ VVG + GKSTLI++L LY N +
Sbjct: 911 TIAVVGYTNAGKSTLISALTKTALYCNER 939
>At1g30400.1 68414.m03716 glutathione S-conjugate ABC transporter
(MRP1) identical to glutathione S-conjugate transporting
ATPase (AtMRP1) [Arabidopsis thaliana] GI:2340166
Length = 1622
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/26 (50%), Positives = 20/26 (76%), Gaps = 1/26 (3%)
Frame = +1
Query: 604 VVGESGLGKSTLINSLF-LGDLYKNR 678
+VG +G GKS+L+N+LF + +L K R
Sbjct: 1269 IVGRTGAGKSSLLNALFRIVELEKGR 1294
>At5g15930.1 68418.m01863 plant adhesion molecule 1 (PAM1) identical
to plant adhesion molecule 1 [Arabidopsis thaliana]
GI:3511223; contains Pfam profile PF00566: TBC domain
Length = 356
Score = 27.9 bits (59), Expect = 6.8
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = -2
Query: 174 PQRKSRATSNVNYDANSKNV*LIKKQ*KNLGKNKITLFVRRPVRIVLRNVR 22
PQR ++ S++NY+ K V +K G + +VRR +V R +R
Sbjct: 34 PQRFTKTKSSINYEKEEKRVTKWRKM-IGTGGSDWKHYVRRKPHVVKRRIR 83
>At3g21250.1 68416.m02685 ABC transporter family protein similar to
MRP-like ABC transporter GB:AAC49791 from [Arabidopsis
thaliana]
Length = 1294
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +1
Query: 604 VVGESGLGKSTLINSLF 654
VVG +G GKSTLI++LF
Sbjct: 1077 VVGRTGSGKSTLISALF 1093
>At2g33240.1 68415.m04072 myosin, putative similar to myosin
(GI:433663) [Arabidopsis thaliana]; myosin my5A
(SP:Q02440) {Gallus gallus}
Length = 1770
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 511 DRGERDYIGFATLPEQVHRKSVKRGFDFTLMVVGESGLGKS 633
D GE FA + + +RK + G ++V GESG GK+
Sbjct: 140 DFGELSPHPFA-VADSAYRKMINEGVSQAILVSGESGAGKT 179
>At1g67460.1 68414.m07681 hypothetical protein contains Pfam domain
PF03193: Protein of unknown function, DUF258
Length = 434
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +1
Query: 595 TLMVVGESGLGKSTLINSL 651
T ++VG SG+GKS+LIN L
Sbjct: 250 TSVIVGPSGVGKSSLINIL 268
>At5g45490.1 68418.m05588 disease resistance protein-related
contains Pfam domain, PF00931: NB-ARC domain, a novel
signalling motif found in plant resistance gene products
Length = 354
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +1
Query: 568 KSVKRGFDFTLMVVGESGLGKSTLINSLFLGDLYKN 675
+ V+R F +L++VGE G+GK+ L +F + K+
Sbjct: 78 QKVRREFK-SLVIVGEYGVGKTALCQKIFNDEAVKS 112
>At5g03530.1 68418.m00309 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 Ras family
Length = 210
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/28 (42%), Positives = 22/28 (78%), Gaps = 2/28 (7%)
Frame = +1
Query: 571 SVKRGFD--FTLMVVGESGLGKSTLINS 648
S + G+D F ++++G+SG+GKS+L+ S
Sbjct: 5 SGQSGYDLSFKILLIGDSGVGKSSLLVS 32
>At3g60970.1 68416.m06823 ABC transporter family protein ABC
transporter-like proteins
Length = 1037
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +1
Query: 604 VVGESGLGKSTLINSLF 654
VVG +G GKSTLI +LF
Sbjct: 818 VVGRTGSGKSTLIQALF 834
>At3g60160.1 68416.m06717 ABC transporter family protein similar to
ATP-binding cassette transporter MRP8 GI:18031899 from
[Arabidopsis thaliana]
Length = 1490
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +1
Query: 604 VVGESGLGKSTLINSLF 654
VVG +G GKSTLI +LF
Sbjct: 1271 VVGRTGSGKSTLIQALF 1287
>At3g54540.1 68416.m06035 ABC transporter family protein similar to
ABC50 GI:10863747 from [Rattus norvegicus]
Length = 723
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +1
Query: 604 VVGESGLGKSTLINSLFLGDL 666
+VG +G GKSTL+N L GDL
Sbjct: 528 IVGPNGAGKSTLLN-LLAGDL 547
>At3g13100.1 68416.m01640 ABC transporter family protein similar to
ATP-binding cassette transporter MRP8 GI:18031899 from
[Arabidopsis thaliana]; contains Pfam profile: PF00005
ABC transporter
Length = 1493
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 604 VVGESGLGKSTLINSLF 654
+VG +G GKSTLI +LF
Sbjct: 1273 IVGRTGCGKSTLIQTLF 1289
>At3g13090.1 68416.m01639 ABC transporter, putative similar to
MRP-like ABC transporter [Arabidopsis thaliana]
GI:2316016; contains Pfam profile: PF00005 ABC
transporter
Length = 1466
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 604 VVGESGLGKSTLINSLF 654
+VG +G GKSTLI +LF
Sbjct: 1251 IVGRTGCGKSTLIQTLF 1267
>At3g09910.1 68416.m01181 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:2723477 from
[Arabidopsis thaliana] ;contains Pfam profile: PF00071
Ras family
Length = 205
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/28 (42%), Positives = 22/28 (78%), Gaps = 2/28 (7%)
Frame = +1
Query: 571 SVKRGFD--FTLMVVGESGLGKSTLINS 648
S + G+D F ++++G+SG+GKS+L+ S
Sbjct: 5 SGQSGYDLSFKILLIGDSGVGKSSLLLS 32
>At2g34660.1 68415.m04258 glutathione S-conjugate ABC transporter
(MRP2) almost identical to MgATP-energized glutathione
S-conjugate pump GI:2909781 from [Arabidopsis thaliana]
Length = 1623
Score = 27.5 bits (58), Expect = 8.9
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 604 VVGESGLGKSTLINSLF 654
+VG +G GKS+L+N+LF
Sbjct: 1274 IVGRTGAGKSSLLNALF 1290
>At1g02530.1 68414.m00204 multidrug resistance P-glycoprotein,
putative similar to multidrug-resistant protein CjMDR1
GI:14715462 from [Coptis japonica]
Length = 1273
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +1
Query: 595 TLMVVGESGLGKSTLIN 645
T +VGESG GKST+IN
Sbjct: 398 TAALVGESGSGKSTVIN 414
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,680,577
Number of Sequences: 28952
Number of extensions: 228042
Number of successful extensions: 769
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 769
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1477286152
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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