Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0988
         (759 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n...    80   7e-14
UniRef50_Q6QI94 Cluster: LRRG00114; n=1; Rattus norvegicus|Rep: ...    48   3e-04
UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY0513...    44   0.004
UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;...    40   0.067
UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep: ...    38   0.27 
UniRef50_A2GSA9 Cluster: Putative uncharacterized protein; n=3; ...    38   0.36 
UniRef50_UPI0000DA1C3D Cluster: PREDICTED: similar to CCR4-NOT t...    33   5.8  
UniRef50_Q7N0G3 Cluster: Similarities with ribonuclease; n=1; Ph...    33   5.8  
UniRef50_A4S1P1 Cluster: Predicted protein; n=1; Ostreococcus lu...    33   5.8  

>UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n=1;
           Gallus gallus|Rep: UPI0000ECD483 UniRef100 entry -
           Gallus gallus
          Length = 103

 Score = 79.8 bits (188), Expect = 7e-14
 Identities = 43/74 (58%), Positives = 47/74 (63%)
 Frame = +3

Query: 414 GAPTARRTNATTSFLTATILVYXXXXXXXXXXXXRLALQLFLVKIFKVYSFRLRGLVRVP 593
           G P AR  + TTSFLTA  L+Y            RLALQ  LVK FKV SF+L+GL RV 
Sbjct: 30  GGPPARSQDPTTSFLTAATLIYAIGAGITAAAGTRLALQWILVKGFKVDSFQLQGLERVL 89

Query: 594 YRYFSSLPPRAGSG 635
           Y YFSSLPPR GSG
Sbjct: 90  YCYFSSLPPRVGSG 103


>UniRef50_Q6QI94 Cluster: LRRG00114; n=1; Rattus norvegicus|Rep:
           LRRG00114 - Rattus norvegicus (Rat)
          Length = 223

 Score = 48.0 bits (109), Expect = 3e-04
 Identities = 22/23 (95%), Positives = 22/23 (95%)
 Frame = +3

Query: 648 LLPSLDVVAVSQAPSPESNPDSP 716
           LLPSLDVVAVSQAPSPE NPDSP
Sbjct: 167 LLPSLDVVAVSQAPSPELNPDSP 189


>UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY05130;
           n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY05130 - Plasmodium yoelii yoelii
          Length = 402

 Score = 44.0 bits (99), Expect = 0.004
 Identities = 18/26 (69%), Positives = 22/26 (84%)
 Frame = +3

Query: 72  GKCFR*CSSCDDPRISPLTSQYECPQ 149
           GKCFR C S ++ RISPLTS+Y+CPQ
Sbjct: 259 GKCFRSCLSPENLRISPLTSEYKCPQ 284



 Score = 42.7 bits (96), Expect = 0.009
 Identities = 34/90 (37%), Positives = 43/90 (47%)
 Frame = +3

Query: 456 LTATILVYXXXXXXXXXXXXRLALQLFLVKIFKVYSFRLRGLVRVPYRYFSSLPPRAGSG 635
           LTATIL+Y            RLALQL   K+   +    +  +  PY   S         
Sbjct: 314 LTATILIYAIGAGITAAAGTRLALQLIFGKVLSSHHSNYKTKIW-PYIVIS--------- 363

Query: 636 *FARLLPSLDVVAVSQAPSPESNPDSPLPV 725
                L  L++ A+SQAPSPESN +SPLPV
Sbjct: 364 --CHYLSYLEL-AISQAPSPESNSNSPLPV 390


>UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;
           n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
           protein - Monodelphis domestica
          Length = 493

 Score = 39.9 bits (89), Expect = 0.067
 Identities = 17/19 (89%), Positives = 17/19 (89%)
 Frame = +2

Query: 578 PRKSPVSLFFVTTSPCREW 634
           PRKSPV LFFVTTSP REW
Sbjct: 24  PRKSPVLLFFVTTSPGREW 42


>UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep:
          Predicted protein - Nematostella vectensis
          Length = 79

 Score = 37.9 bits (84), Expect = 0.27
 Identities = 17/21 (80%), Positives = 17/21 (80%)
 Frame = -1

Query: 63 FHQSRTKVRGSKAIRYRPSSN 1
          F   RTKVRGSK IRYRPSSN
Sbjct: 6  FRCQRTKVRGSKTIRYRPSSN 26


>UniRef50_A2GSA9 Cluster: Putative uncharacterized protein; n=3;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 76

 Score = 37.5 bits (83), Expect = 0.36
 Identities = 16/27 (59%), Positives = 21/27 (77%)
 Frame = +3

Query: 615 PPRAGSG*FARLLPSLDVVAVSQAPSP 695
           PP+  SG  +RLL  +D+VA+SQAPSP
Sbjct: 46  PPKVSSGKVSRLLLPVDIVAISQAPSP 72



 Score = 34.3 bits (75), Expect = 3.3
 Identities = 11/13 (84%), Positives = 11/13 (84%)
 Frame = +2

Query: 488 SWNYRGCWHQTCP 526
           SWNYR CWHQT P
Sbjct: 7   SWNYRSCWHQTGP 19


>UniRef50_UPI0000DA1C3D Cluster: PREDICTED: similar to CCR4-NOT
           transcription complex, subunit 3; n=1; Rattus
           norvegicus|Rep: PREDICTED: similar to CCR4-NOT
           transcription complex, subunit 3 - Rattus norvegicus
          Length = 750

 Score = 33.5 bits (73), Expect = 5.8
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = +3

Query: 606 SSLPPRAGSG*FARLLPSLDVVAVSQAPSPESNPDSPLP 722
           +++P   G G  A   P L + A S  PSPE  PD+PLP
Sbjct: 607 AAIPTGHGRGRLAPHAPPLXLRAHSAVPSPEPLPDTPLP 645


>UniRef50_Q7N0G3 Cluster: Similarities with ribonuclease; n=1;
           Photorhabdus luminescens subsp. laumondii|Rep:
           Similarities with ribonuclease - Photorhabdus
           luminescens subsp. laumondii
          Length = 272

 Score = 33.5 bits (73), Expect = 5.8
 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
 Frame = +2

Query: 368 SPTICSANVSVSPRMRCTDSAAH-KCNYELFNRNNFSIRYWSWNYRGCWHQTC 523
           SP  C        R++ ++  A  +  YE F    FS   +SW   G W QTC
Sbjct: 92  SPAFCKGKAKNIERLKKSNKLAEAQREYEKFELQCFSENKFSWVIHGLWAQTC 144


>UniRef50_A4S1P1 Cluster: Predicted protein; n=1; Ostreococcus
          lucimarinus CCE9901|Rep: Predicted protein -
          Ostreococcus lucimarinus CCE9901
          Length = 72

 Score = 33.5 bits (73), Expect = 5.8
 Identities = 15/21 (71%), Positives = 15/21 (71%)
 Frame = -1

Query: 63 FHQSRTKVRGSKAIRYRPSSN 1
          FH  RTKV GSK IRY PS N
Sbjct: 6  FHCQRTKVGGSKMIRYHPSLN 26


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 745,079,915
Number of Sequences: 1657284
Number of extensions: 15393305
Number of successful extensions: 40409
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 38583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40388
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62969581935
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)