Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0988
         (759 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_01_0019 + 403078-404211                                             31   1.3  
09_02_0327 - 7284829-7284889,7284946-7286126                           28   9.3  
01_05_0005 - 16886553-16886946,16887079-16887404                       28   9.3  

>09_01_0019 + 403078-404211
          Length = 377

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 17/42 (40%), Positives = 21/42 (50%)
 Frame = -3

Query: 715 GESGFDSGEGA*ETATTSKEGSRRANYPLPARGGSDEK*RYG 590
           G S  DSG GA ++A   K  SRR  +      GSD   R+G
Sbjct: 321 GASDGDSGSGASDSADDRKRSSRRRRHRKSESSGSDGDERHG 362


>09_02_0327 - 7284829-7284889,7284946-7286126
          Length = 413

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +3

Query: 615 PPRAGSG*FARLL-PSLDVVAVSQAPSPESNPDSPLPVTP 731
           PP  G   + R+    LDV + S +PSP S+ ++P P  P
Sbjct: 65  PPPRGRRYYRRVSGDDLDVPSCSSSPSPPSDEENPPPNPP 104


>01_05_0005 - 16886553-16886946,16887079-16887404
          Length = 239

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +2

Query: 461 RNNFSIRYWSWNYRGC 508
           R+N S RYW W   GC
Sbjct: 90  RSNSSFRYWRWQPHGC 105


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,356,834
Number of Sequences: 37544
Number of extensions: 440260
Number of successful extensions: 1272
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1232
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1271
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2027850416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)