Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0988
(759 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17617| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 6e-10
SB_57691| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 7e-08
SB_6465| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 7e-08
SB_2383| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 7e-08
SB_27342| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 7e-08
SB_58054| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 3e-07
SB_1204| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 8e-06
SB_59794| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_33624| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_18209| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_6881| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_1546| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_13730| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_25244| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.015
SB_18079| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.015
SB_26327| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.027
SB_34518| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.062
SB_15948| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.77
SB_492| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_12062| Best HMM Match : NUC129 (HMM E-Value=9.2) 29 3.1
SB_51316| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_50608| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_42465| Best HMM Match : 2-oxoacid_dh (HMM E-Value=0) 29 3.1
SB_13633| Best HMM Match : Glyco_hydro_31 (HMM E-Value=0) 29 5.4
SB_34251| Best HMM Match : FA_hydroxylase (HMM E-Value=5.5) 29 5.4
SB_35396| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_24390| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
>SB_17617| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 61.7 bits (143), Expect = 6e-10
Identities = 30/37 (81%), Positives = 31/37 (83%)
Frame = -2
Query: 113 SWIVARRTSAKAFAKGVFINQERKLEVRRRLDTALVL 3
SWI RRT+AKAFAK VFINQERKLE RRR DT LVL
Sbjct: 4 SWIYERRTTAKAFAKNVFINQERKLEDRRRSDTVLVL 40
>SB_57691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 54.8 bits (126), Expect = 7e-08
Identities = 27/32 (84%), Positives = 28/32 (87%)
Frame = -2
Query: 98 RRTSAKAFAKGVFINQERKLEVRRRLDTALVL 3
RRT+AKAFAK VFINQERKLE RRR DT LVL
Sbjct: 9 RRTTAKAFAKNVFINQERKLEDRRRSDTVLVL 40
>SB_6465| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 54.8 bits (126), Expect = 7e-08
Identities = 27/32 (84%), Positives = 28/32 (87%)
Frame = -2
Query: 98 RRTSAKAFAKGVFINQERKLEVRRRLDTALVL 3
RRT+AKAFAK VFINQERKLE RRR DT LVL
Sbjct: 9 RRTTAKAFAKNVFINQERKLEDRRRSDTVLVL 40
>SB_2383| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 54.8 bits (126), Expect = 7e-08
Identities = 27/32 (84%), Positives = 28/32 (87%)
Frame = -2
Query: 98 RRTSAKAFAKGVFINQERKLEVRRRLDTALVL 3
RRT+AKAFAK VFINQERKLE RRR DT LVL
Sbjct: 9 RRTTAKAFAKNVFINQERKLEDRRRSDTVLVL 40
>SB_27342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 48
Score = 54.8 bits (126), Expect = 7e-08
Identities = 27/32 (84%), Positives = 28/32 (87%)
Frame = -2
Query: 98 RRTSAKAFAKGVFINQERKLEVRRRLDTALVL 3
RRT+AKAFAK VFINQERKLE RRR DT LVL
Sbjct: 11 RRTTAKAFAKNVFINQERKLEDRRRSDTVLVL 42
>SB_58054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 52.8 bits (121), Expect = 3e-07
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = -2
Query: 95 RTSAKAFAKGVFINQERKLEVRRRLDTALVL 3
RT+AKAFAK VFINQERKLE RRR DT LVL
Sbjct: 29 RTTAKAFAKNVFINQERKLEDRRRSDTVLVL 59
>SB_1204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 48.0 bits (109), Expect = 8e-06
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = -2
Query: 95 RTSAKAFAKGVFINQERKLEVRRRLDT 15
RT+AKAFAK VFINQERKLE RRR DT
Sbjct: 2 RTTAKAFAKNVFINQERKLEDRRRSDT 28
>SB_59794| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 128
Score = 42.7 bits (96), Expect = 3e-04
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = +3
Query: 663 DVVAVSQAPSPESNPDSPLPV 725
DVVAVSQAPSPESNP+SP PV
Sbjct: 105 DVVAVSQAPSPESNPNSPSPV 125
>SB_33624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 42.3 bits (95), Expect = 4e-04
Identities = 22/33 (66%), Positives = 26/33 (78%), Gaps = 1/33 (3%)
Frame = -2
Query: 98 RRTS-AKAFAKGVFINQERKLEVRRRLDTALVL 3
R+T+ ++ AK VFINQERKLE RRR DT LVL
Sbjct: 8 RKTNYCESIAKNVFINQERKLEDRRRSDTVLVL 40
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -1
Query: 120 VKFLDRRKTNISESICQRCFHQSRTKV 40
VKFLD RKTN ESI + F K+
Sbjct: 2 VKFLDLRKTNYCESIAKNVFINQERKL 28
>SB_18209| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 180
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/59 (38%), Positives = 30/59 (50%)
Frame = -3
Query: 589 TLTRPRNRNEYTLNILTRNNWRASLXXXXXXXXXXXAYTKIVAVKKLVVAFVRRAVGAP 413
T + R ++++ R +WRASL AY K+VAVKKLVV F VG P
Sbjct: 44 TCQQTTTRVHAAMHLVIRIHWRASLVPAAAVIPAPIAYIKVVAVKKLVVGFRDGTVGPP 102
>SB_6881| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/33 (60%), Positives = 25/33 (75%), Gaps = 1/33 (3%)
Frame = -2
Query: 98 RRTS-AKAFAKGVFINQERKLEVRRRLDTALVL 3
R+T+ ++ + VFINQERKLE RRR DT LVL
Sbjct: 8 RKTNYCESICQDVFINQERKLEDRRRSDTVLVL 40
Score = 33.9 bits (74), Expect = 0.14
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = -1
Query: 120 VKFLDRRKTNISESICQRCFHQSRTKV 40
VKFLD RKTN ESICQ F K+
Sbjct: 2 VKFLDLRKTNYCESICQDVFINQERKL 28
>SB_1546| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 38.7 bits (86), Expect = 0.005
Identities = 17/27 (62%), Positives = 18/27 (66%)
Frame = -1
Query: 120 VKFLDRRKTNISESICQRCFHQSRTKV 40
VKFLD RKTN ESICQ CF K+
Sbjct: 2 VKFLDLRKTNYCESICQECFINQERKL 28
Score = 36.3 bits (80), Expect = 0.027
Identities = 19/33 (57%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Frame = -2
Query: 98 RRTS-AKAFAKGVFINQERKLEVRRRLDTALVL 3
R+T+ ++ + FINQERKLE RRR DT LVL
Sbjct: 8 RKTNYCESICQECFINQERKLEDRRRSDTVLVL 40
>SB_13730| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 38.7 bits (86), Expect = 0.005
Identities = 17/27 (62%), Positives = 18/27 (66%)
Frame = -1
Query: 120 VKFLDRRKTNISESICQRCFHQSRTKV 40
VKFLD RKTN ESICQ CF K+
Sbjct: 2 VKFLDLRKTNYCESICQECFINQERKL 28
Score = 36.3 bits (80), Expect = 0.027
Identities = 19/33 (57%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Frame = -2
Query: 98 RRTS-AKAFAKGVFINQERKLEVRRRLDTALVL 3
R+T+ ++ + FINQERKLE RRR DT LVL
Sbjct: 8 RKTNYCESICQECFINQERKLEDRRRSDTVLVL 40
>SB_25244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 212
Score = 37.1 bits (82), Expect = 0.015
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = +3
Query: 672 AVSQAPSPESNPDSPLPV 725
AVSQAPSPESNP+SP PV
Sbjct: 52 AVSQAPSPESNPNSPSPV 69
>SB_18079| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 37.1 bits (82), Expect = 0.015
Identities = 21/42 (50%), Positives = 23/42 (54%)
Frame = -3
Query: 538 RNNWRASLXXXXXXXXXXXAYTKIVAVKKLVVAFVRRAVGAP 413
R +WRASL AY K+VAVKKLVV F VG P
Sbjct: 14 RIHWRASLVPAAAVIPAPIAYIKVVAVKKLVVGFRDGTVGPP 55
>SB_26327| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 36.3 bits (80), Expect = 0.027
Identities = 19/33 (57%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Frame = -2
Query: 98 RRTS-AKAFAKGVFINQERKLEVRRRLDTALVL 3
R+T+ ++ + FINQERKLE RRR DT LVL
Sbjct: 8 RKTNYCESICQECFINQERKLEDRRRSDTVLVL 40
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -1
Query: 117 KFLDRRKTNISESICQRCFHQSRTKV 40
+ L RKTN ESICQ CF K+
Sbjct: 3 EILGFRKTNYCESICQECFINQERKL 28
>SB_34518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 337
Score = 35.1 bits (77), Expect = 0.062
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +1
Query: 673 PFLRLPLRNRTLIPRYP 723
PFLRLPLRNRTLI R+P
Sbjct: 224 PFLRLPLRNRTLILRHP 240
>SB_15948| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.77
Identities = 19/38 (50%), Positives = 20/38 (52%)
Frame = -3
Query: 526 RASLXXXXXXXXXXXAYTKIVAVKKLVVAFVRRAVGAP 413
RASL AY K+VAVKKLVV F VG P
Sbjct: 5 RASLVPAAAVIPAPIAYIKVVAVKKLVVGFRDGTVGPP 42
>SB_492| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 67
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/42 (45%), Positives = 20/42 (47%)
Frame = -3
Query: 538 RNNWRASLXXXXXXXXXXXAYTKIVAVKKLVVAFVRRAVGAP 413
R ASL AY K+VAVKKLVV F VG P
Sbjct: 24 RERRAASLVPAAAVIPAPIAYIKVVAVKKLVVGFRDGTVGPP 65
>SB_12062| Best HMM Match : NUC129 (HMM E-Value=9.2)
Length = 111
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -3
Query: 478 YTKIVAVKKLVVAFVRRAVGAP 413
Y K+VAVKKLVV F VG P
Sbjct: 88 YIKVVAVKKLVVGFRDGTVGPP 109
>SB_51316| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -3
Query: 478 YTKIVAVKKLVVAFVRRAVGAP 413
Y K+VAVKKLVV F VG P
Sbjct: 89 YIKVVAVKKLVVGFRDGTVGPP 110
>SB_50608| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -3
Query: 478 YTKIVAVKKLVVAFVRRAVGAP 413
Y K+VAVKKLVV F VG P
Sbjct: 17 YIKVVAVKKLVVGFRDGTVGPP 38
>SB_42465| Best HMM Match : 2-oxoacid_dh (HMM E-Value=0)
Length = 441
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 654 PSLDVVAVSQAPSPESNPDSPLPVTP 731
P+ DV+A Q P P S D PLP P
Sbjct: 75 PAEDVMAAHQEPKPTSAIDQPLPPPP 100
>SB_13633| Best HMM Match : Glyco_hydro_31 (HMM E-Value=0)
Length = 663
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +3
Query: 228 RNIQAAFLARFEHSNLFK--VKLSAHLDTHRRAPR*DFDIEPAFFRTPAHRRYA 383
+N + LAR+ + +F ++ AHLDT RR P D+ R RYA
Sbjct: 573 KNPEPELLARWYQTGVFTPFLRAHAHLDTKRREPWLFDDVYKNVIRDALRTRYA 626
>SB_34251| Best HMM Match : FA_hydroxylase (HMM E-Value=5.5)
Length = 203
Score = 28.7 bits (61), Expect = 5.4
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +2
Query: 440 CNYELFNRNNFSIRYWSWNYRGCWH 514
C + RN +RYW W R C H
Sbjct: 91 CEVTVIARNILPVRYWIWLSRKCGH 115
>SB_35396| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 53
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = -3
Query: 181 QNSEVMINRDNWGHSY-CDVRGEILGSSQDEHQRKHLP 71
Q EV +++ GH Y C GE++ S++D H+ +P
Sbjct: 7 QCKEVESSKEILGHPYVCAFAGEVIQSTEDVHKPSWIP 44
>SB_24390| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 397
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +2
Query: 377 ICSANVSVSPRMRCTDSAAHKCNYELFNRNNFSIRYW-SWNY 499
I S S R+RCT S + KC + + F W S+NY
Sbjct: 139 ISSGYYGRSYRLRCTSSTSWKCRLTSISESYFKGNNWFSYNY 180
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,229,968
Number of Sequences: 59808
Number of extensions: 491841
Number of successful extensions: 1380
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1236
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1380
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2070332524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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