Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0983
(599 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g16480.1 68416.m02103 mitochondrial processing peptidase alph... 78 4e-15
At1g51980.1 68414.m05863 mitochondrial processing peptidase alph... 77 9e-15
At3g02090.2 68416.m00175 mitochondrial processing peptidase beta... 50 9e-07
At3g02090.1 68416.m00174 mitochondrial processing peptidase beta... 50 9e-07
At3g29080.1 68416.m03641 hypothetical protein 29 2.4
At5g24360.1 68418.m02872 protein kinase family protein / Ire1 ho... 28 4.1
At1g43980.1 68414.m05073 pentatricopeptide (PPR) repeat-containi... 28 5.4
At5g56730.1 68418.m07080 peptidase M16 family protein / insulina... 27 7.2
At5g18390.1 68418.m02163 pentatricopeptide (PPR) repeat-containi... 27 9.5
At3g21580.2 68416.m02722 expressed protein 27 9.5
>At3g16480.1 68416.m02103 mitochondrial processing peptidase alpha
subunit, putative similar to mitochondrial processing
peptidase alpha subunit, mitochondrial precursor,
Alpha-MPP (Ubiquinol-cytochrome C reductase subunit II)
[Potato] SWISS-PROT:P29677
Length = 499
Score = 78.2 bits (184), Expect = 4e-15
Identities = 44/154 (28%), Positives = 79/154 (51%), Gaps = 2/154 (1%)
Frame = +1
Query: 142 RIQSSVLPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAELGLSHVLRSAAGLTTKNISS 321
+++++ LPN +A + +P + + GS YE G +H+L A +T N S
Sbjct: 73 KLKTTTLPNGLTIATEMSPNPAASIGLYVDCGSIYETPQFRGATHLLERMAFKSTLNRSH 132
Query: 322 FLIQRKLSQIGAYVSASGDREFIYYTLEATQDKLNDALEILNNLISNQEFRPWELNDNAP 501
F + R++ IG SAS RE + YT++A + + + +E+L + + N F WE+N+
Sbjct: 133 FRLVREIEAIGGNTSASASREQMGYTIDALKTYVPEMVEVLIDSVRNPAFLDWEVNEELR 192
Query: 502 RLKYDI--ISLPPQIRAVDLLHKAAYRRGLGNSL 597
++K +I + P ++ +H A Y L N L
Sbjct: 193 KVKVEIGEFATNPMGFLLEAVHSAGYSGALANPL 226
>At1g51980.1 68414.m05863 mitochondrial processing peptidase alpha
subunit, putative similar to mitochondrial processing
peptidase alpha subunit, mitochondrial precursor,
Alpha-MPP (Ubiquinol-cytochrome C reductase subunit II)
[Potato] SWISS-PROT:P29677
Length = 503
Score = 77.0 bits (181), Expect = 9e-15
Identities = 44/154 (28%), Positives = 78/154 (50%), Gaps = 2/154 (1%)
Frame = +1
Query: 142 RIQSSVLPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAELGLSHVLRSAAGLTTKNISS 321
++Q + LPN +A+ +P + + GS YE G +H+L A +T N +
Sbjct: 77 KLQITTLPNGLKIASETTPNPAASIGLYVDCGSIYEAPYFHGATHLLERMAFKSTLNRTH 136
Query: 322 FLIQRKLSQIGAYVSASGDREFIYYTLEATQDKLNDALEILNNLISNQEFRPWELNDNAP 501
F + R++ IG SAS RE + YT++A + + + +E+L + + N F WE+N+
Sbjct: 137 FRLVREIEAIGGNTSASASREQMSYTIDALKTYVPEMVEVLIDSVRNPAFLDWEVNEELR 196
Query: 502 RLKYDIISLP--PQIRAVDLLHKAAYRRGLGNSL 597
++K +I L P ++ +H A Y L + L
Sbjct: 197 KMKVEIAELAKNPMGFLLEAIHSAGYSGPLASPL 230
>At3g02090.2 68416.m00175 mitochondrial processing peptidase beta
subunit, putative similar to mitochondrial processing
peptidase beta subunit, mitochondrial precursor,
Beta-MPP [Human] SWISS-PROT:O75439
Length = 535
Score = 50.4 bits (115), Expect = 9e-07
Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 3/144 (2%)
Frame = +1
Query: 154 SVLPNKTFVAALDNGSPVTR-VTIAFKAGSRYEPQAELGLSHVLRSAAGLTTKNISSFLI 330
+ LPN VA N S T V + AGSR+E G +H L T + +
Sbjct: 100 TTLPNGLRVATESNLSAKTATVGVWIDAGSRFESDETNGTAHFLEHMIFKGTDRRTVRAL 159
Query: 331 QRKLSQIGAYVSASGDREFIYYTLEATQDKLNDALEILNNLISNQEFRPWELNDNAPRLK 510
+ ++ IG +++A RE Y + +N AL++L +++ N +F +N +
Sbjct: 160 EEEIEDIGGHLNAYTSREQTTYYAKVLDSNVNQALDVLADILQNSKFEEQRINRERDVIL 219
Query: 511 YDIISLPPQIRAV--DLLHKAAYR 576
++ + Q V D LH A++
Sbjct: 220 REMQEVEGQTDEVVLDHLHATAFQ 243
>At3g02090.1 68416.m00174 mitochondrial processing peptidase beta
subunit, putative similar to mitochondrial processing
peptidase beta subunit, mitochondrial precursor,
Beta-MPP [Human] SWISS-PROT:O75439
Length = 531
Score = 50.4 bits (115), Expect = 9e-07
Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 3/144 (2%)
Frame = +1
Query: 154 SVLPNKTFVAALDNGSPVTR-VTIAFKAGSRYEPQAELGLSHVLRSAAGLTTKNISSFLI 330
+ LPN VA N S T V + AGSR+E G +H L T + +
Sbjct: 100 TTLPNGLRVATESNLSAKTATVGVWIDAGSRFESDETNGTAHFLEHMIFKGTDRRTVRAL 159
Query: 331 QRKLSQIGAYVSASGDREFIYYTLEATQDKLNDALEILNNLISNQEFRPWELNDNAPRLK 510
+ ++ IG +++A RE Y + +N AL++L +++ N +F +N +
Sbjct: 160 EEEIEDIGGHLNAYTSREQTTYYAKVLDSNVNQALDVLADILQNSKFEEQRINRERDVIL 219
Query: 511 YDIISLPPQIRAV--DLLHKAAYR 576
++ + Q V D LH A++
Sbjct: 220 REMQEVEGQTDEVVLDHLHATAFQ 243
>At3g29080.1 68416.m03641 hypothetical protein
Length = 445
Score = 29.1 bits (62), Expect = 2.4
Identities = 12/55 (21%), Positives = 24/55 (43%)
Frame = -1
Query: 560 WSKSTARIWGGREIISYFRRGALSLSSHGLNSWFEIKLFRISSASFNLSCVASKV 396
W + R WGG E++ RG + + + G+ +E K ++ N ++
Sbjct: 38 WERDLFRDWGGAEVVETGMRGMMGVKA-GVTEGWEDKQAKVLEVGVNAEVAGDRI 91
>At5g24360.1 68418.m02872 protein kinase family protein / Ire1
homolog-1 (IRE1-1) identical to Ire1 homolog-1
[Arabidopsis thaliana] GI:15277137; cDNA Ire1 homolog-1
GI:15277136;
Length = 881
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/67 (23%), Positives = 30/67 (44%)
Frame = +1
Query: 262 LGLSHVLRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDREFIYYTLEATQDKLNDALEI 441
+ + +++S + K I + + K S I + D FIY +LE LND +
Sbjct: 484 VAVKRLVQSHHDVAQKEILNLMASDKHSNIVRWYGVDQDEHFIYISLELCACSLNDLIYA 543
Query: 442 LNNLISN 462
+ L+ +
Sbjct: 544 SSALLES 550
>At1g43980.1 68414.m05073 pentatricopeptide (PPR) repeat-containing
protein contains INTERPRO:IPR002885 PPR repeats
Length = 633
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = -3
Query: 390 DEFSVSRSTNICSNLREFALNKE 322
DE++VS +ICS+LRE + K+
Sbjct: 234 DEYTVSMVVSICSDLRELSKGKQ 256
>At5g56730.1 68418.m07080 peptidase M16 family protein / insulinase
family protein contains Pfam domain, PF05193: Peptidase
M16 inactive domain
Length = 956
Score = 27.5 bits (58), Expect = 7.2
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +1
Query: 193 NGSPVTRVTIAF--KAGSRYEPQAELGLSHVLRSAAGLTTKNISSFLIQRKLSQIGA 357
N P R +A K GS E + + G++H++ A T ++ I + L IGA
Sbjct: 56 NSKPRMRAALALAVKVGSVLEEEDQRGVAHIVEHLAFSATTRYTNHDIVKFLESIGA 112
>At5g18390.1 68418.m02163 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 459
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +1
Query: 382 EFIYYTLEATQDKLNDALEILNNLISNQEFRP 477
EF++ L AT ND+L N SN + P
Sbjct: 78 EFVFRVLRATSRSSNDSLRFFNWARSNPSYTP 109
>At3g21580.2 68416.m02722 expressed protein
Length = 384
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -3
Query: 249 FITRASFEGDCDTGNW 202
FI RA+ +GD TGNW
Sbjct: 60 FIVRATVDGDGKTGNW 75
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,210,662
Number of Sequences: 28952
Number of extensions: 268001
Number of successful extensions: 649
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 649
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1187288784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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