Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0982
         (733 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0167 + 5221910-5222516,5222826-5224642                           32   0.41 
07_03_1037 - 23438205-23441219,23443509-23444513,23444627-23446708     29   3.8  
01_01_0540 + 3957622-3960903                                           29   3.8  
02_04_0148 - 20198407-20201424                                         29   5.0  
10_08_0921 + 21586034-21586229,21586464-21586576,21586768-215868...    28   6.6  

>09_02_0167 + 5221910-5222516,5222826-5224642
          Length = 807

 Score = 32.3 bits (70), Expect = 0.41
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +2

Query: 392 LVSGLFSKPRLPLGYTFVATVPRGACRINVTEL 490
           +VS LF+   L L YT V  +PR  CR+N  ++
Sbjct: 494 VVSNLFNLRYLDLAYTRVKVIPRSLCRLNKLQM 526


>07_03_1037 - 23438205-23441219,23443509-23444513,23444627-23446708
          Length = 2033

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +2

Query: 182  IPYVDGNAPCALNCRPMGQQFYATLS 259
            +P V GNA  ++NC+P+   FY  ++
Sbjct: 1922 LPQVIGNAAWSVNCKPLAGSFYVGIT 1947


>01_01_0540 + 3957622-3960903
          Length = 1093

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +2

Query: 182  IPYVDGNAPCALNCRPMGQQFYATLSIV 265
            +P V GN    +NCRP+   +YA L+ V
Sbjct: 950  LPQVIGNVVWRINCRPLKTGYYAGLTAV 977


>02_04_0148 - 20198407-20201424
          Length = 1005

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +2

Query: 269 DGTPCTQDGLPAICVQGTCKVIGRESVLAGSNSR 370
           DG   +QDG   I V+GTC V  R  ++  S+++
Sbjct: 737 DGVVTSQDGREGILVRGTCHVSERLGLVNSSDAK 770


>10_08_0921 +
           21586034-21586229,21586464-21586576,21586768-21586875,
           21586967-21587205,21587301-21587399,21587448-21587535,
           21587617-21587750,21588274-21588362,21588718-21588751,
           21588830-21588898,21589216-21589339
          Length = 430

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
 Frame = +2

Query: 344 SVLAGSNSRELRCGRRLV-SGLFSKPRLPLGYTFVATVPRGACRINVTELAS 496
           SV  GS    LR GR ++ SG    P  P       TVP  +CR+ +T  AS
Sbjct: 353 SVYVGSEKAALRAGRDMLRSGFHVTPIRP------PTVPPNSCRLRITLSAS 398


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,813,031
Number of Sequences: 37544
Number of extensions: 495071
Number of successful extensions: 1308
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1270
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1308
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1921741964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)