Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0982
(733 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U64857-3|AAM29666.1| 1487|Caenorhabditis elegans Hypothetical pr... 114 5e-26
U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical pr... 114 5e-26
U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical pr... 114 5e-26
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr... 95 6e-20
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p... 95 6e-20
Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical pr... 42 6e-04
Z81517-8|CAM84818.1| 357|Caenorhabditis elegans Hypothetical pr... 33 0.28
Z50006-7|CAA90302.2| 1461|Caenorhabditis elegans Hypothetical pr... 33 0.28
Z50004-4|CAA90293.2| 1461|Caenorhabditis elegans Hypothetical pr... 33 0.28
AF098996-3|AAC68707.2| 349|Caenorhabditis elegans Serpentine re... 33 0.28
AB066246-1|BAC05514.1| 1461|Caenorhabditis elegans ADT-1 protein. 33 0.28
Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical pr... 30 1.9
U42846-1|AAA83600.2| 872|Caenorhabditis elegans Hypothetical pr... 30 1.9
AF068719-3|AAM45352.1| 603|Caenorhabditis elegans Hypothetical ... 29 2.6
AF068719-2|AAC17783.1| 633|Caenorhabditis elegans Hypothetical ... 29 2.6
Z70686-10|CAD21656.1| 533|Caenorhabditis elegans Hypothetical p... 29 3.4
Z70683-8|CAD21626.1| 533|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z19155-2|CAA79561.1| 1139|Caenorhabditis elegans Hypothetical pr... 29 3.4
U88168-6|AAC24401.1| 127|Caenorhabditis elegans Hypothetical pr... 29 4.5
AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical ... 29 4.5
U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr... 28 5.9
AL117206-9|CAL22706.1| 292|Caenorhabditis elegans Hypothetical ... 28 5.9
AF022967-11|AAB69874.1| 192|Caenorhabditis elegans Hypothetical... 28 7.8
>U64857-3|AAM29666.1| 1487|Caenorhabditis elegans Hypothetical
protein C37C3.6c protein.
Length = 1487
Score = 114 bits (275), Expect = 5e-26
Identities = 71/225 (31%), Positives = 103/225 (45%), Gaps = 9/225 (4%)
Frame = +2
Query: 35 RQINKGCLGVDRRYHECNTQPCAGGVLNTRAEQCSSFDRRPFRGRFYTWIPYVDGNAPCA 214
RQ + C G RY CN C G + RAEQCS F+ G ++ W PY G C
Sbjct: 101 RQCSGDCTGASVRYISCNLNACESGT-DFRAEQCSKFNDEALDGNYHKWTPY-KGKNKCE 158
Query: 215 LNCRP-MGQQFYATLSIVDDGTPCTQDGLPAICVQGTCKVIGRESVLAGSNSRELRCGR- 388
L C+P G +Y V DGT C ICV G C +G + L GS+ + +CG+
Sbjct: 159 LVCKPESGNFYYKWADKVVDGTKCDSKSND-ICVDGECLPVGCDGKL-GSSLKFDKCGKC 216
Query: 389 -------RLVSGLFSKPRLPLGYTFVATVPRGACRINVTELASSENYIALRLSNSSYILN 547
+ + G F + L GY + +P GA I + E S N +AL+ + + LN
Sbjct: 217 DGDGSTCKTIEGRFDERNLSPGYHDIIKLPEGATNIKIQEARKSTNNLALKNGSDHFYLN 276
Query: 548 GEFAVSAPGMYEAAGAIFLYTRTAGLDNVHANGPIYHPIDIMILY 682
G + E G IF+Y A + + A GP+ + + +L+
Sbjct: 277 GNGLIQVEKEVEVGGTIFVYD-DAEPETLSAQGPLSEELTVALLF 320
>U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical
protein C37C3.6a protein.
Length = 1558
Score = 114 bits (275), Expect = 5e-26
Identities = 71/225 (31%), Positives = 103/225 (45%), Gaps = 9/225 (4%)
Frame = +2
Query: 35 RQINKGCLGVDRRYHECNTQPCAGGVLNTRAEQCSSFDRRPFRGRFYTWIPYVDGNAPCA 214
RQ + C G RY CN C G + RAEQCS F+ G ++ W PY G C
Sbjct: 101 RQCSGDCTGASVRYISCNLNACESGT-DFRAEQCSKFNDEALDGNYHKWTPY-KGKNKCE 158
Query: 215 LNCRP-MGQQFYATLSIVDDGTPCTQDGLPAICVQGTCKVIGRESVLAGSNSRELRCGR- 388
L C+P G +Y V DGT C ICV G C +G + L GS+ + +CG+
Sbjct: 159 LVCKPESGNFYYKWADKVVDGTKCDSKSND-ICVDGECLPVGCDGKL-GSSLKFDKCGKC 216
Query: 389 -------RLVSGLFSKPRLPLGYTFVATVPRGACRINVTELASSENYIALRLSNSSYILN 547
+ + G F + L GY + +P GA I + E S N +AL+ + + LN
Sbjct: 217 DGDGSTCKTIEGRFDERNLSPGYHDIIKLPEGATNIKIQEARKSTNNLALKNGSDHFYLN 276
Query: 548 GEFAVSAPGMYEAAGAIFLYTRTAGLDNVHANGPIYHPIDIMILY 682
G + E G IF+Y A + + A GP+ + + +L+
Sbjct: 277 GNGLIQVEKEVEVGGTIFVYD-DAEPETLSAQGPLSEELTVALLF 320
>U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical
protein C37C3.6b protein.
Length = 2167
Score = 114 bits (275), Expect = 5e-26
Identities = 71/225 (31%), Positives = 103/225 (45%), Gaps = 9/225 (4%)
Frame = +2
Query: 35 RQINKGCLGVDRRYHECNTQPCAGGVLNTRAEQCSSFDRRPFRGRFYTWIPYVDGNAPCA 214
RQ + C G RY CN C G + RAEQCS F+ G ++ W PY G C
Sbjct: 101 RQCSGDCTGASVRYISCNLNACESGT-DFRAEQCSKFNDEALDGNYHKWTPY-KGKNKCE 158
Query: 215 LNCRP-MGQQFYATLSIVDDGTPCTQDGLPAICVQGTCKVIGRESVLAGSNSRELRCGR- 388
L C+P G +Y V DGT C ICV G C +G + L GS+ + +CG+
Sbjct: 159 LVCKPESGNFYYKWADKVVDGTKCDSKSND-ICVDGECLPVGCDGKL-GSSLKFDKCGKC 216
Query: 389 -------RLVSGLFSKPRLPLGYTFVATVPRGACRINVTELASSENYIALRLSNSSYILN 547
+ + G F + L GY + +P GA I + E S N +AL+ + + LN
Sbjct: 217 DGDGSTCKTIEGRFDERNLSPGYHDIIKLPEGATNIKIQEARKSTNNLALKNGSDHFYLN 276
Query: 548 GEFAVSAPGMYEAAGAIFLYTRTAGLDNVHANGPIYHPIDIMILY 682
G + E G IF+Y A + + A GP+ + + +L+
Sbjct: 277 GNGLIQVEKEVEVGGTIFVYD-DAEPETLSAQGPLSEELTVALLF 320
>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
F25H8.3 protein.
Length = 2165
Score = 94.7 bits (225), Expect = 6e-20
Identities = 76/245 (31%), Positives = 114/245 (46%), Gaps = 26/245 (10%)
Frame = +2
Query: 35 RQINKGCLGVDRRYHECNTQPCAGGVLNTRAEQCSSFDRRP--FRGRFYT---WIPYVDG 199
R K C+G RY CNTQ C R QCS F+ + +G T W+P
Sbjct: 636 RNGGKYCVGQRERYRSCNTQECPWDTQPYREVQCSEFNNKDIGIQGVASTNTHWVPKYAN 695
Query: 200 NAP---CALNCRPMGQ-QFYATLSIVDDGTPCTQDGLPAICVQGTCKVIGRESVLAGSNS 367
AP C L CR G FY V DGTPC ++G ICV G C G + L +
Sbjct: 696 VAPNERCKLYCRLSGSAAFYLLRDKVVDGTPCDRNG-DDICVAGACMPAGCDHQLHSTLR 754
Query: 368 RELRCG--------RRLVSGLFSKPRLPLGYTFVATVPRGACRINVTE-----LASSENY 508
R+ +CG ++V G F++ + GY V +P G+ I++ + + +NY
Sbjct: 755 RD-KCGVCGGDDSSCKVVKGTFNE-QGTFGYNEVMKIPAGSANIDIRQKGYNNMKEDDNY 812
Query: 509 IALRLSNSSYILNGEFAVS-APGMYEAAGAIFLYTRT-AGLDNVHANGPIYHPIDIMILY 682
++LR +N ++LNG F VS A + Y+ + A ++ ++ GPI I + +L
Sbjct: 813 LSLRAANGEFLLNGHFQVSLARQQIAFQDTVLEYSGSDAIIERINGTGPIRSDIYVHVLS 872
Query: 683 --THP 691
+HP
Sbjct: 873 VGSHP 877
>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
protein F25H8.3 protein.
Length = 2165
Score = 94.7 bits (225), Expect = 6e-20
Identities = 76/245 (31%), Positives = 114/245 (46%), Gaps = 26/245 (10%)
Frame = +2
Query: 35 RQINKGCLGVDRRYHECNTQPCAGGVLNTRAEQCSSFDRRP--FRGRFYT---WIPYVDG 199
R K C+G RY CNTQ C R QCS F+ + +G T W+P
Sbjct: 636 RNGGKYCVGQRERYRSCNTQECPWDTQPYREVQCSEFNNKDIGIQGVASTNTHWVPKYAN 695
Query: 200 NAP---CALNCRPMGQ-QFYATLSIVDDGTPCTQDGLPAICVQGTCKVIGRESVLAGSNS 367
AP C L CR G FY V DGTPC ++G ICV G C G + L +
Sbjct: 696 VAPNERCKLYCRLSGSAAFYLLRDKVVDGTPCDRNG-DDICVAGACMPAGCDHQLHSTLR 754
Query: 368 RELRCG--------RRLVSGLFSKPRLPLGYTFVATVPRGACRINVTE-----LASSENY 508
R+ +CG ++V G F++ + GY V +P G+ I++ + + +NY
Sbjct: 755 RD-KCGVCGGDDSSCKVVKGTFNE-QGTFGYNEVMKIPAGSANIDIRQKGYNNMKEDDNY 812
Query: 509 IALRLSNSSYILNGEFAVS-APGMYEAAGAIFLYTRT-AGLDNVHANGPIYHPIDIMILY 682
++LR +N ++LNG F VS A + Y+ + A ++ ++ GPI I + +L
Sbjct: 813 LSLRAANGEFLLNGHFQVSLARQQIAFQDTVLEYSGSDAIIERINGTGPIRSDIYVHVLS 872
Query: 683 --THP 691
+HP
Sbjct: 873 VGSHP 877
>Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical
protein F53B6.2a protein.
Length = 1045
Score = 41.5 bits (93), Expect = 6e-04
Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 4/105 (3%)
Frame = +2
Query: 59 GVDRRYHECNTQPCAGGVLNTR--AEQCSSFDRRPFRGRFYTWIPYVDGNAPCALNCRPM 232
GV R+ C T C+G + + A++ R R V C + CR
Sbjct: 42 GVSRQLRRCLTSKCSGESVRFKVCAQKTCESKSRLARDTICGGEEIVS-RGQCEVVCRSR 100
Query: 233 --GQQFYATLSIVDDGTPCTQDGLPAICVQGTCKVIGRESVLAGS 361
G F L VDDGTPC A+C +G+C+++G + +++ S
Sbjct: 101 LTGANF---LWRVDDGTPCQAATSRAVCSKGSCQIVGCDGLISSS 142
>Z81517-8|CAM84818.1| 357|Caenorhabditis elegans Hypothetical
protein F28B1.9 protein.
Length = 357
Score = 32.7 bits (71), Expect = 0.28
Identities = 23/92 (25%), Positives = 37/92 (40%), Gaps = 3/92 (3%)
Frame = +2
Query: 14 VLTVRVTRQINKGCLGVDRRYHECNTQPCAGGVLNTRAEQCSSFDRRPFRGRFYTWIPYV 193
+L + + Q GCL V + N Q C V E + + + G W P V
Sbjct: 10 LLLISLFLQTVSGCLVVREKDPNPNIQNCNCNVKLFNQEDIRNNEGGRYLGDLQVWDPIV 69
Query: 194 DGNAPC--ALNCRPM-GQQFYATLSIVDDGTP 280
+ C A+ C+P+ G + T+ +G P
Sbjct: 70 ESKQDCWLAITCKPVPGVSSFFTVMFRSNGPP 101
>Z50006-7|CAA90302.2| 1461|Caenorhabditis elegans Hypothetical
protein C02B4.1 protein.
Length = 1461
Score = 32.7 bits (71), Expect = 0.28
Identities = 20/65 (30%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Frame = +2
Query: 134 CSSFDRRPFR-GRFYTWIPYVDGNAPCALNCRPMGQQFYATLSIVDDGTPCTQDGLPAIC 310
CSS P + + T + PC + C +G + DGTPC G A C
Sbjct: 621 CSSIKYDPHKPDQQLTGEGFEHSTQPCRVWCHLIGSELIRNKGQFPDGTPC---GFDAYC 677
Query: 311 VQGTC 325
V G C
Sbjct: 678 VGGQC 682
>Z50004-4|CAA90293.2| 1461|Caenorhabditis elegans Hypothetical
protein C02B4.1 protein.
Length = 1461
Score = 32.7 bits (71), Expect = 0.28
Identities = 20/65 (30%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Frame = +2
Query: 134 CSSFDRRPFR-GRFYTWIPYVDGNAPCALNCRPMGQQFYATLSIVDDGTPCTQDGLPAIC 310
CSS P + + T + PC + C +G + DGTPC G A C
Sbjct: 621 CSSIKYDPHKPDQQLTGEGFEHSTQPCRVWCHLIGSELIRNKGQFPDGTPC---GFDAYC 677
Query: 311 VQGTC 325
V G C
Sbjct: 678 VGGQC 682
>AF098996-3|AAC68707.2| 349|Caenorhabditis elegans Serpentine
receptor, class w protein79 protein.
Length = 349
Score = 32.7 bits (71), Expect = 0.28
Identities = 14/44 (31%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Frame = +2
Query: 440 FVATVPRGACR-INVTELASSENYIALRLSNSSYILNGEFAVSA 568
F+A+ P GA INV+E+ + +++ L L +S+Y+++ F +++
Sbjct: 265 FLASAPIGALDFINVSEIVTESSFLRLSLDHSAYLMSAIFCLNS 308
>AB066246-1|BAC05514.1| 1461|Caenorhabditis elegans ADT-1 protein.
Length = 1461
Score = 32.7 bits (71), Expect = 0.28
Identities = 20/65 (30%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Frame = +2
Query: 134 CSSFDRRPFR-GRFYTWIPYVDGNAPCALNCRPMGQQFYATLSIVDDGTPCTQDGLPAIC 310
CSS P + + T + PC + C +G + DGTPC G A C
Sbjct: 621 CSSIKYDPHKPDQQLTGEGFEHSTQPCRVWCHLIGSELIRNKGQFPDGTPC---GFDAYC 677
Query: 311 VQGTC 325
V G C
Sbjct: 678 VGGQC 682
>Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical
protein M02G9.1 protein.
Length = 909
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -1
Query: 103 CTRLCVALVVSSVDPKASFVDLSCNSNC*DRC 8
CT+ C + +S +P AS + SCN+ C D+C
Sbjct: 215 CTQSCHSQCISQGNPAASCSN-SCNTECSDKC 245
>U42846-1|AAA83600.2| 872|Caenorhabditis elegans Hypothetical
protein T19D2.1 protein.
Length = 872
Score = 29.9 bits (64), Expect = 1.9
Identities = 24/94 (25%), Positives = 34/94 (36%), Gaps = 2/94 (2%)
Frame = +2
Query: 53 CLGVDRRYHECNTQPCAGGVLNTRAEQ-CSSF-DRRPFRGRFYTWIPYVDGNAPCALNCR 226
C G + R C+ C G + A + CS D + A C + C
Sbjct: 492 CQGDEARGMVCHRDVCNGDSIENYATRVCSRLRDENAIPNTILSGEGMQFEQAMCKIWCL 551
Query: 227 PMGQQFYATLSIVDDGTPCTQDGLPAICVQGTCK 328
G T+S DG PC G C++G C+
Sbjct: 552 ISGSTNIRTVSNFPDGAPC---GPGQYCIKGECR 582
>AF068719-3|AAM45352.1| 603|Caenorhabditis elegans Hypothetical
protein H14N18.4b protein.
Length = 603
Score = 29.5 bits (63), Expect = 2.6
Identities = 23/99 (23%), Positives = 40/99 (40%), Gaps = 4/99 (4%)
Frame = +2
Query: 317 GTCKVIGRESVLAGSNSRELRCGRRLVSGLFSKPRLPLGYTFVATV---PRGACR-INVT 484
G C IGR+ ++ G N+ + L G + +G FV T+ G C+ IN
Sbjct: 82 GLCSEIGRDVLIEGGNAVDAMIASLLCIGTVNPQSSGIGGGFVMTLYNASTGMCQTINAR 141
Query: 485 ELASSENYIALRLSNSSYILNGEFAVSAPGMYEAAGAIF 601
E A + + + N + G +++ P +F
Sbjct: 142 ETAPAAATETMFVDNPKESVMGYKSIATPSELHGFWTVF 180
>AF068719-2|AAC17783.1| 633|Caenorhabditis elegans Hypothetical
protein H14N18.4a protein.
Length = 633
Score = 29.5 bits (63), Expect = 2.6
Identities = 23/99 (23%), Positives = 40/99 (40%), Gaps = 4/99 (4%)
Frame = +2
Query: 317 GTCKVIGRESVLAGSNSRELRCGRRLVSGLFSKPRLPLGYTFVATV---PRGACR-INVT 484
G C IGR+ ++ G N+ + L G + +G FV T+ G C+ IN
Sbjct: 112 GLCSEIGRDVLIEGGNAVDAMIASLLCIGTVNPQSSGIGGGFVMTLYNASTGMCQTINAR 171
Query: 485 ELASSENYIALRLSNSSYILNGEFAVSAPGMYEAAGAIF 601
E A + + + N + G +++ P +F
Sbjct: 172 ETAPAAATETMFVDNPKESVMGYKSIATPSELHGFWTVF 210
>Z70686-10|CAD21656.1| 533|Caenorhabditis elegans Hypothetical
protein F13B12.6 protein.
Length = 533
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = -1
Query: 271 VVNYGQSRVELLTHRPTIQSTWRITVNIWNPCVKPSSKWSSIK 143
+++ QS V LLTH+PT R++ IW V +S+ S K
Sbjct: 399 IISRDQSEV-LLTHKPTGSFLVRVSERIWGYTVSYASRDGSFK 440
>Z70683-8|CAD21626.1| 533|Caenorhabditis elegans Hypothetical
protein F13B12.6 protein.
Length = 533
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = -1
Query: 271 VVNYGQSRVELLTHRPTIQSTWRITVNIWNPCVKPSSKWSSIK 143
+++ QS V LLTH+PT R++ IW V +S+ S K
Sbjct: 399 IISRDQSEV-LLTHKPTGSFLVRVSERIWGYTVSYASRDGSFK 440
>Z19155-2|CAA79561.1| 1139|Caenorhabditis elegans Hypothetical
protein F54G8.3 protein.
Length = 1139
Score = 29.1 bits (62), Expect = 3.4
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +2
Query: 551 EFAVSAPGMYEAAGAIFLYTRTAGLD 628
+FAV AP ++ AGA+++Y T ++
Sbjct: 411 DFAVGAPFAFDGAGAVYIYLGTKNIE 436
>U88168-6|AAC24401.1| 127|Caenorhabditis elegans Hypothetical
protein K11H12.7 protein.
Length = 127
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 29 VTRQINKGCLGVDRRYHECNTQPC 100
+ R+ NKG LGV R Y +C+ C
Sbjct: 81 IERKSNKGSLGVSRVYSQCSENLC 104
>AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical
protein F53H1.4a protein.
Length = 1370
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = -1
Query: 130 FCARIQ---NASCTRLCVALVVSSVDPKASFVDLSC 32
FC R+Q NASC + +A + +D + + +LSC
Sbjct: 1084 FCRRVQEASNASCLHMLLAYFDARIDQQRTLPELSC 1119
>U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical
protein C16A3.7 protein.
Length = 1119
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +2
Query: 278 PCTQDGLPAICVQGTCKVIGRESVLAGSNSRELRCG 385
PCT+ P C++ CK+ +S G + +RCG
Sbjct: 333 PCTELCHPGPCIE--CKLFTTKSCNCGKTKKSVRCG 366
>AL117206-9|CAL22706.1| 292|Caenorhabditis elegans Hypothetical
protein Y67A10A.11 protein.
Length = 292
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 32 TRQINKGCLGVDRRYHECNTQPCAGGVLNTRAEQC 136
T+ N C+GV + CNTQ C +N E C
Sbjct: 57 TQMGNCPCIGVTTKLMICNTQACNWPRVNATYENC 91
>AF022967-11|AAB69874.1| 192|Caenorhabditis elegans Hypothetical
protein C13A2.2 protein.
Length = 192
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/60 (26%), Positives = 26/60 (43%)
Frame = +2
Query: 29 VTRQINKGCLGVDRRYHECNTQPCAGGVLNTRAEQCSSFDRRPFRGRFYTWIPYVDGNAP 208
VT N V+ RY++CN Q + NT + + G Y I +++G+ P
Sbjct: 95 VTTSENIDRKSVNCRYYDCNRQEISNSAFNTIVAPMAVINCPRKFGAVYMSISFMEGDKP 154
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,352,517
Number of Sequences: 27780
Number of extensions: 418790
Number of successful extensions: 1123
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1110
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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