Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0981
(701 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z29443-8|CAE45742.1| 455|Caenorhabditis elegans Hypothetical pr... 179 2e-45
Z29443-7|CAA82571.2| 497|Caenorhabditis elegans Hypothetical pr... 179 2e-45
U40483-1|AAA99775.1| 322|Caenorhabditis elegans NEX1 annexin pr... 123 1e-28
U00064-7|AAB52702.1| 322|Caenorhabditis elegans Annexin family ... 123 1e-28
Z32680-3|CAA83598.1| 317|Caenorhabditis elegans Hypothetical pr... 116 2e-26
U88315-15|AAB42365.1| 351|Caenorhabditis elegans Annexin family... 91 9e-19
L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical pr... 31 1.1
L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical pr... 31 1.1
U46668-4|AAA93348.3| 951|Caenorhabditis elegans Nematode astaci... 29 2.4
Z72503-1|CAA96596.2| 617|Caenorhabditis elegans Hypothetical pr... 29 3.2
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 29 3.2
AF047656-13|AAC05105.1| 313|Caenorhabditis elegans Collagen pro... 29 3.2
AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical... 29 3.2
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 29 4.3
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 29 4.3
Z49072-1|CAA88884.1| 938|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z69793-6|CAI46593.1| 424|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z69793-5|CAA93673.2| 441|Caenorhabditis elegans Hypothetical pr... 28 7.4
U53344-2|AAP13769.1| 301|Caenorhabditis elegans Collagen protei... 27 9.8
U53344-1|AAA96223.1| 363|Caenorhabditis elegans Collagen protei... 27 9.8
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 27 9.8
U39644-6|AAO44907.1| 300|Caenorhabditis elegans Collagen protei... 27 9.8
U39644-5|AAO44906.1| 300|Caenorhabditis elegans Collagen protei... 27 9.8
U39644-4|AAA80357.2| 301|Caenorhabditis elegans Collagen protei... 27 9.8
U39644-3|AAA80358.2| 301|Caenorhabditis elegans Collagen protei... 27 9.8
>Z29443-8|CAE45742.1| 455|Caenorhabditis elegans Hypothetical
protein T07C4.9b protein.
Length = 455
Score = 179 bits (435), Expect = 2e-45
Identities = 90/192 (46%), Positives = 120/192 (62%)
Frame = +3
Query: 126 PTVVGVPNFNAVEDAAALRAAMKGFGTDEQAIIDILTTRSNMQRQAISQAFTREYGRDLI 305
P+V V FN+ DA LR AMKG G + +I IL R+N QRQ IS+AF YG+DLI
Sbjct: 141 PSVFPVQGFNSNADAEVLRKAMKGLGCNNSKVISILCQRTNWQRQEISKAFKVMYGKDLI 200
Query: 306 EDLKSELGGHFEDVIVALMTPPEEYLCQELHRCMEGMGTDEDTLVEILCTRTKPEIAAIV 485
++LK EL G FED+I+ALM P Y ++LHR MEG+GT E L+EI+ +RT +I +
Sbjct: 201 KELKGELHGDFEDLILALMDAPAIYDAKQLHRAMEGLGTKESVLIEIMTSRTNAQIQQVR 260
Query: 486 DTYERLYDRPLAEHMCSETSGDFRRLLTLIVVGARADEAPADPERARELAQELYDAGEAK 665
D Y+ L+ + L + ETSG F+RLL + G R + + D RA + A+ L AGE +
Sbjct: 261 DAYKMLFKKDLERDLIGETSGHFKRLLVSLCAGGRDESSQTDGLRANQDARRLLQAGEKR 320
Query: 666 WGTDEEVFNRIL 701
GTDE FN IL
Sbjct: 321 LGTDESTFNAIL 332
Score = 58.4 bits (135), Expect = 5e-09
Identities = 34/141 (24%), Positives = 69/141 (48%), Gaps = 3/141 (2%)
Frame = +3
Query: 177 LRAAMKGFGTDEQAIIDILTTRSNMQRQAISQAFTREYGRDLIEDLKSELGGHFED---V 347
L+A K GTDE IL +++ Q + + + + + + + ++ E G D
Sbjct: 314 LQAGEKRLGTDESTFNAILASQNFSQLRLVFEEYQKASNHSIEKAIEFEFSGDIRDGLLA 373
Query: 348 IVALMTPPEEYLCQELHRCMEGMGTDEDTLVEILCTRTKPEIAAIVDTYERLYDRPLAEH 527
++A++ Y + LH M+G+GT ++ L+ + TR + ++ I + ++ LY L
Sbjct: 374 VIAVIRNRPAYFAKLLHDSMKGLGTRDNDLIRLCVTRAEYDMGDIRNMFQSLYRTSLENM 433
Query: 528 MCSETSGDFRRLLTLIVVGAR 590
+ + SG ++ L +V G R
Sbjct: 434 IKGDCSGAYKEGLIALVNGNR 454
>Z29443-7|CAA82571.2| 497|Caenorhabditis elegans Hypothetical
protein T07C4.9a protein.
Length = 497
Score = 179 bits (435), Expect = 2e-45
Identities = 90/192 (46%), Positives = 120/192 (62%)
Frame = +3
Query: 126 PTVVGVPNFNAVEDAAALRAAMKGFGTDEQAIIDILTTRSNMQRQAISQAFTREYGRDLI 305
P+V V FN+ DA LR AMKG G + +I IL R+N QRQ IS+AF YG+DLI
Sbjct: 183 PSVFPVQGFNSNADAEVLRKAMKGLGCNNSKVISILCQRTNWQRQEISKAFKVMYGKDLI 242
Query: 306 EDLKSELGGHFEDVIVALMTPPEEYLCQELHRCMEGMGTDEDTLVEILCTRTKPEIAAIV 485
++LK EL G FED+I+ALM P Y ++LHR MEG+GT E L+EI+ +RT +I +
Sbjct: 243 KELKGELHGDFEDLILALMDAPAIYDAKQLHRAMEGLGTKESVLIEIMTSRTNAQIQQVR 302
Query: 486 DTYERLYDRPLAEHMCSETSGDFRRLLTLIVVGARADEAPADPERARELAQELYDAGEAK 665
D Y+ L+ + L + ETSG F+RLL + G R + + D RA + A+ L AGE +
Sbjct: 303 DAYKMLFKKDLERDLIGETSGHFKRLLVSLCAGGRDESSQTDGLRANQDARRLLQAGEKR 362
Query: 666 WGTDEEVFNRIL 701
GTDE FN IL
Sbjct: 363 LGTDESTFNAIL 374
Score = 58.4 bits (135), Expect = 5e-09
Identities = 34/141 (24%), Positives = 69/141 (48%), Gaps = 3/141 (2%)
Frame = +3
Query: 177 LRAAMKGFGTDEQAIIDILTTRSNMQRQAISQAFTREYGRDLIEDLKSELGGHFED---V 347
L+A K GTDE IL +++ Q + + + + + + + ++ E G D
Sbjct: 356 LQAGEKRLGTDESTFNAILASQNFSQLRLVFEEYQKASNHSIEKAIEFEFSGDIRDGLLA 415
Query: 348 IVALMTPPEEYLCQELHRCMEGMGTDEDTLVEILCTRTKPEIAAIVDTYERLYDRPLAEH 527
++A++ Y + LH M+G+GT ++ L+ + TR + ++ I + ++ LY L
Sbjct: 416 VIAVIRNRPAYFAKLLHDSMKGLGTRDNDLIRLCVTRAEYDMGDIRNMFQSLYRTSLENM 475
Query: 528 MCSETSGDFRRLLTLIVVGAR 590
+ + SG ++ L +V G R
Sbjct: 476 IKGDCSGAYKEGLIALVNGNR 496
>U40483-1|AAA99775.1| 322|Caenorhabditis elegans NEX1 annexin
protein.
Length = 322
Score = 123 bits (296), Expect = 1e-28
Identities = 63/179 (35%), Positives = 106/179 (59%)
Frame = +3
Query: 129 TVVGVPNFNAVEDAAALRAAMKGFGTDEQAIIDILTTRSNMQRQAISQAFTREYGRDLIE 308
T+V FNA A + A++ ++ A+++++T+ SN QRQ + + + +YG+D+I+
Sbjct: 7 TIVDAREFNAPMFAEKIDRALRA--GEKDAVVNVITSISNAQRQQLREPYKLKYGKDIIQ 64
Query: 309 DLKSELGGHFEDVIVALMTPPEEYLCQELHRCMEGMGTDEDTLVEILCTRTKPEIAAIVD 488
L + G E I ALM P +Y ++L M+G+GTDE L+EILC+RT ++ AI
Sbjct: 65 ALDKKFSGDLEKAIFALMETPLDYDVKQLKAAMKGLGTDEAVLIEILCSRTVDQLRAIRV 124
Query: 489 TYERLYDRPLAEHMCSETSGDFRRLLTLIVVGARADEAPADPERARELAQELYDAGEAK 665
TYE+ Y + L + +TSG+FR LL +V G++ + +A++ A L+ G+AK
Sbjct: 125 TYEKEYGKALEADIAGDTSGEFRDLLVSLVTGSKDGSHDTNDAQAKDDAVRLFADGKAK 183
Score = 64.5 bits (150), Expect = 7e-11
Identities = 34/132 (25%), Positives = 68/132 (51%), Gaps = 3/132 (2%)
Frame = +3
Query: 207 DEQAIIDILTTRSNMQRQAISQAFTREYGRDLIEDLKSELGGHFED---VIVALMTPPEE 377
D + IL T++ Q + + F G + + ++ E G + IV + ++
Sbjct: 188 DGTHFLHILATQNQYQLRKVFAYFQELAGGSIEKSIEKEFSGDLQKSYLTIVRAASDKQK 247
Query: 378 YLCQELHRCMEGMGTDEDTLVEILCTRTKPEIAAIVDTYERLYDRPLAEHMCSETSGDFR 557
+ Q+LH M+G+GT ++ L+ ++ TR++ ++ I ++ LY + LA+ + +TSG +R
Sbjct: 248 FFAQQLHASMKGLGTRDNDLIRVIVTRSEVDLELIKAEFQELYSKSLADTVKGDTSGAYR 307
Query: 558 RLLTLIVVGARA 593
L I+ G A
Sbjct: 308 DALLSIINGNHA 319
Score = 45.6 bits (103), Expect = 3e-05
Identities = 19/65 (29%), Positives = 36/65 (55%)
Frame = +3
Query: 168 AAALRAAMKGFGTDEQAIIDILTTRSNMQRQAISQAFTREYGRDLIEDLKSELGGHFEDV 347
A L A+MKG GT + +I ++ TRS + + I F Y + L + +K + G + D
Sbjct: 250 AQQLHASMKGLGTRDNDLIRVIVTRSEVDLELIKAEFQELYSKSLADTVKGDTSGAYRDA 309
Query: 348 IVALM 362
+++++
Sbjct: 310 LLSII 314
>U00064-7|AAB52702.1| 322|Caenorhabditis elegans Annexin family
protein 1 protein.
Length = 322
Score = 123 bits (296), Expect = 1e-28
Identities = 63/179 (35%), Positives = 106/179 (59%)
Frame = +3
Query: 129 TVVGVPNFNAVEDAAALRAAMKGFGTDEQAIIDILTTRSNMQRQAISQAFTREYGRDLIE 308
T+V FNA A + A++ ++ A+++++T+ SN QRQ + + + +YG+D+I+
Sbjct: 7 TIVDAREFNAPMFAEKIDRALRA--GEKDAVVNVITSISNAQRQQLREPYKLKYGKDIIQ 64
Query: 309 DLKSELGGHFEDVIVALMTPPEEYLCQELHRCMEGMGTDEDTLVEILCTRTKPEIAAIVD 488
L + G E I ALM P +Y ++L M+G+GTDE L+EILC+RT ++ AI
Sbjct: 65 ALDKKFSGDLEKAIFALMETPLDYDVKQLKAAMKGLGTDEAVLIEILCSRTVDQLRAIRV 124
Query: 489 TYERLYDRPLAEHMCSETSGDFRRLLTLIVVGARADEAPADPERARELAQELYDAGEAK 665
TYE+ Y + L + +TSG+FR LL +V G++ + +A++ A L+ G+AK
Sbjct: 125 TYEKEYGKALEADIAGDTSGEFRDLLVSLVTGSKDGSHDTNDAQAKDDAVRLFADGKAK 183
Score = 64.5 bits (150), Expect = 7e-11
Identities = 34/132 (25%), Positives = 68/132 (51%), Gaps = 3/132 (2%)
Frame = +3
Query: 207 DEQAIIDILTTRSNMQRQAISQAFTREYGRDLIEDLKSELGGHFED---VIVALMTPPEE 377
D + IL T++ Q + + F G + + ++ E G + IV + ++
Sbjct: 188 DGTHFLHILATQNQYQLRKVFAYFQELAGGSIEKSIEKEFSGDLQKSYLTIVRAASDKQK 247
Query: 378 YLCQELHRCMEGMGTDEDTLVEILCTRTKPEIAAIVDTYERLYDRPLAEHMCSETSGDFR 557
+ Q+LH M+G+GT ++ L+ ++ TR++ ++ I ++ LY + LA+ + +TSG +R
Sbjct: 248 FFAQQLHASMKGLGTRDNDLIRVIVTRSEVDLELIKAEFQELYSKSLADTVKGDTSGAYR 307
Query: 558 RLLTLIVVGARA 593
L I+ G A
Sbjct: 308 DALLSIINGNHA 319
Score = 45.6 bits (103), Expect = 3e-05
Identities = 19/65 (29%), Positives = 36/65 (55%)
Frame = +3
Query: 168 AAALRAAMKGFGTDEQAIIDILTTRSNMQRQAISQAFTREYGRDLIEDLKSELGGHFEDV 347
A L A+MKG GT + +I ++ TRS + + I F Y + L + +K + G + D
Sbjct: 250 AQQLHASMKGLGTRDNDLIRVIVTRSEVDLELIKAEFQELYSKSLADTVKGDTSGAYRDA 309
Query: 348 IVALM 362
+++++
Sbjct: 310 LLSII 314
>Z32680-3|CAA83598.1| 317|Caenorhabditis elegans Hypothetical
protein C28A5.3 protein.
Length = 317
Score = 116 bits (279), Expect = 2e-26
Identities = 63/179 (35%), Positives = 103/179 (57%)
Frame = +3
Query: 144 PNFNAVEDAAALRAAMKGFGTDEQAIIDILTTRSNMQRQAISQAFTREYGRDLIEDLKSE 323
P F+ V + L A++ ++ I++IL + +N QRQ I + YG+DL +++K
Sbjct: 10 PYFDEVAASEQLEKALRN--KEKLKILEILVSVNNTQRQMIRTPYKTRYGKDLEDEIKKA 67
Query: 324 LGGHFEDVIVALMTPPEEYLCQELHRCMEGMGTDEDTLVEILCTRTKPEIAAIVDTYERL 503
G FED +VAL+ P + EL+R ++G+GT+E L+EIL TRT EI A +TY
Sbjct: 68 FSGDFEDFLVALLQTPTKLDVTELNRSVKGLGTNEKNLIEILTTRTNEEIEAAKNTYFMT 127
Query: 504 YDRPLAEHMCSETSGDFRRLLTLIVVGARADEAPADPERARELAQELYDAGEAKWGTDE 680
Y + L + + ++TSGDFRRLL +I+ R + AD + A ++ + + K G ++
Sbjct: 128 YSKSLEDAISADTSGDFRRLLIVILQAKREEGGFADTFKVGPHAAQILKSFDKKSGVEK 186
Score = 62.9 bits (146), Expect = 2e-10
Identities = 34/142 (23%), Positives = 72/142 (50%), Gaps = 3/142 (2%)
Frame = +3
Query: 168 AAALRAAMKGFGTDEQAIIDILTTRSNMQRQAISQAFTREYGRDLIEDLKSELGGHFEDV 347
A L++ K G ++ I T + Q + + R+ G++ + + EL G F+++
Sbjct: 172 AQILKSFDKKSGVEKFDAFKIFATCNGAHIQKVIEEVERQSGKEFQKLIDKELSGDFKNL 231
Query: 348 IVALMTPPEE---YLCQELHRCMEGMGTDEDTLVEILCTRTKPEIAAIVDTYERLYDRPL 518
+++L+ Y +H +GMGT + L+ IL +R++ ++ I ++ L+ +PL
Sbjct: 232 VLSLIETSRNKPRYFANSIHLATKGMGTRDKDLIRILVSRSENDLVIIEHEFQTLFGKPL 291
Query: 519 AEHMCSETSGDFRRLLTLIVVG 584
+ + E ++R LT++V G
Sbjct: 292 TQLIKEECKAEYRDGLTMLVKG 313
>U88315-15|AAB42365.1| 351|Caenorhabditis elegans Annexin family
protein 4 protein.
Length = 351
Score = 90.6 bits (215), Expect = 9e-19
Identities = 46/151 (30%), Positives = 82/151 (54%)
Frame = +3
Query: 144 PNFNAVEDAAALRAAMKGFGTDEQAIIDILTTRSNMQRQAISQAFTREYGRDLIEDLKSE 323
P+F+ V+ + LR+++ G T +Q II+ + +N QRQ I A+ Y R L+EDL+ E
Sbjct: 23 PDFHPVQASETLRSSLHGLETKDQTIINTVLYHNNFQRQKILGAYEDMYSRKLLEDLEEE 82
Query: 324 LGGHFEDVIVALMTPPEEYLCQELHRCMEGMGTDEDTLVEILCTRTKPEIAAIVDTYERL 503
GG F ++ AL P Y Q +++ + D +EI CTR+ ++ A+ DTY+
Sbjct: 83 CGGFFFEMCQALFKPAPNYDAQCVYKSLSNRHGDRSVAIEIACTRSPRQMRALRDTYQID 142
Query: 504 YDRPLAEHMCSETSGDFRRLLTLIVVGARAD 596
Y + L + + + G +++ L++ R +
Sbjct: 143 YRKSLDKDLTVKVEGVVGKMMHLLLCNNREE 173
Score = 48.8 bits (111), Expect = 4e-06
Identities = 20/69 (28%), Positives = 38/69 (55%)
Frame = +3
Query: 378 YLCQELHRCMEGMGTDEDTLVEILCTRTKPEIAAIVDTYERLYDRPLAEHMCSETSGDFR 557
Y ++L M D+ T++ I +R++ ++ I Y+R Y RPL +C TSG++
Sbjct: 266 YFAEKLRTAMTAERVDQSTIIRICVSRSEIDLQDISLEYKRKYQRPLEHDICQSTSGEYT 325
Query: 558 RLLTLIVVG 584
R++ ++ G
Sbjct: 326 RMICTLLSG 334
>L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical protein
ZK688.5b protein.
Length = 1595
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +1
Query: 580 SGPAQTRRRPTPSGPASSRRSCTTPGRPSGGPTRRSSTE 696
SG + R TPS PA + R+ + P PTR+ S +
Sbjct: 967 SGSSDQPARSTPSPPAPTPRTTSAPATVQSSPTRQESMD 1005
>L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical protein
ZK688.5a protein.
Length = 1620
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +1
Query: 580 SGPAQTRRRPTPSGPASSRRSCTTPGRPSGGPTRRSSTE 696
SG + R TPS PA + R+ + P PTR+ S +
Sbjct: 967 SGSSDQPARSTPSPPAPTPRTTSAPATVQSSPTRQESMD 1005
>U46668-4|AAA93348.3| 951|Caenorhabditis elegans Nematode astacin
protease protein39 protein.
Length = 951
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = -2
Query: 496 SYVSTIAAISGLVLVQRISTRVSSSVPIPSIQRCSSWHRYSSGGVIRATITSSK*PPNSD 317
S TIA+ +L+Q S+ ++S+P + Y++ GVI + PPNSD
Sbjct: 348 SLFRTIASSGNRMLIQVRSSTPAASLPFATYYAICGGPIYANEGVIHSPKYPESYPPNSD 407
>Z72503-1|CAA96596.2| 617|Caenorhabditis elegans Hypothetical
protein C26C6.3 protein.
Length = 617
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/69 (26%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Frame = +3
Query: 129 TVVGVPNFNAVEDAAALRAA--MKGFGTDEQAIIDILTTRSNMQRQAISQAFT-REYGRD 299
+++ + + +D A L A+ + F +E+ + + M++ A S++F RE+G D
Sbjct: 12 SLISISICSKADDPALLVASEFKEHFNVEEKQLETVEELLIKMKKLAHSRSFKGREFGHD 71
Query: 300 LIEDLKSEL 326
+ED K E+
Sbjct: 72 AVEDSKKEV 80
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = +1
Query: 571 SLSSGPAQTRRRPTPSGPASSRRSCTTPGRPSGGPTRRSSTES 699
S SSG + + P PS S S TTP S G T S++ S
Sbjct: 858 STSSGSSMITQSPYPSQSTSPVESSTTPSPGSPGTTLTSTSPS 900
>AF047656-13|AAC05105.1| 313|Caenorhabditis elegans Collagen
protein 116 protein.
Length = 313
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/53 (32%), Positives = 19/53 (35%)
Frame = +1
Query: 520 PSTCAPRRRATFAAS*HSLSSGPAQTRRRPTPSGPASSRRSCTTPGRPSGGPT 678
P T A R+ A PA P P+GP PG P GPT
Sbjct: 133 PGTTATRQMAMDYTGGSECVKCPAGPPGAPGPNGPPGYEGQMGVPGLPGDGPT 185
>AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical
protein C09E7.8a protein.
Length = 1114
Score = 29.1 bits (62), Expect = 3.2
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 10/85 (11%)
Frame = +3
Query: 354 ALMTPPEEYLCQELHRCME----------GMGTDEDTLVEILCTRTKPEIAAIVDTYERL 503
+LM +Y+ +ELH+C++ G T + L EIL + ++ I + +E+L
Sbjct: 16 SLMLVALDYIPKELHKCLDMDRLEDVSAGGAYTTKQMLEEILNSDSRFRIYGNAEVFEKL 75
Query: 504 YDRPLAEHMCSETSGDFRRLLTLIV 578
++ + C E G F +L L V
Sbjct: 76 LEKYMNFTSCREKFG-FEKLQVLCV 99
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 28.7 bits (61), Expect = 4.3
Identities = 22/55 (40%), Positives = 25/55 (45%)
Frame = +1
Query: 532 APRRRATFAAS*HSLSSGPAQTRRRPTPSGPASSRRSCTTPGRPSGGPTRRSSTE 696
APRRR S S P RRR +PSG S RS P+ P RR S +
Sbjct: 450 APRRR-------RSPSKSPQAPRRRRSPSG--SKSRSPRRRRSPAAAPRRRQSPQ 495
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/34 (50%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = +1
Query: 604 RPTPSGPASSRRSCTTPG--RPSGGPTRRSSTES 699
RP PSGPA S PG PSG P SS S
Sbjct: 550 RPKPSGPAGPAPSGEPPGPFDPSGPPPSESSEGS 583
>Z49072-1|CAA88884.1| 938|Caenorhabditis elegans Hypothetical protein
T24A11.1a protein.
Length = 938
Score = 28.3 bits (60), Expect = 5.6
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +1
Query: 532 APRRRATFAAS*HSLSSGPAQTRRRPTPSGPASSRRSCTTPGRPSGGP-TRRSSTES 699
+P +T ++S + L+S + TR +P P SS S ++P RPS G +R SST++
Sbjct: 881 SPPASSTSSSSLNMLAS-MSPTRPQPIPISCKSSSNSISSP-RPSPGEFSRHSSTQA 935
>Z69793-6|CAI46593.1| 424|Caenorhabditis elegans Hypothetical
protein R03A10.4b protein.
Length = 424
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +3
Query: 219 IIDILTTRSNMQRQAISQAFTREYGRDLIEDLKSELGGHFEDVIV 353
+ D+L S + +TR YG ++ D+ +++ HF +V V
Sbjct: 49 VTDLLENLSKHPELTAAHQYTRGYGHPMLVDILAKMYSHFYNVQV 93
>Z69793-5|CAA93673.2| 441|Caenorhabditis elegans Hypothetical
protein R03A10.4a protein.
Length = 441
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +3
Query: 219 IIDILTTRSNMQRQAISQAFTREYGRDLIEDLKSELGGHFEDVIV 353
+ D+L S + +TR YG ++ D+ +++ HF +V V
Sbjct: 66 VTDLLENLSKHPELTAAHQYTRGYGHPMLVDILAKMYSHFYNVQV 110
>U53344-2|AAP13769.1| 301|Caenorhabditis elegans Collagen protein
166, isoform b protein.
Length = 301
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = +1
Query: 583 GPAQTRRRPTPSGPASSRRSCTTPGRP-SGGP 675
GPA P P GPA S PG P S GP
Sbjct: 224 GPAGAPGAPGPDGPAGPAGSPGAPGNPGSQGP 255
>U53344-1|AAA96223.1| 363|Caenorhabditis elegans Collagen protein
166, isoform a protein.
Length = 363
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = +1
Query: 583 GPAQTRRRPTPSGPASSRRSCTTPGRP-SGGP 675
GPA P P GPA S PG P S GP
Sbjct: 286 GPAGAPGAPGPDGPAGPAGSPGAPGNPGSQGP 317
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/34 (50%), Positives = 18/34 (52%)
Frame = +1
Query: 583 GPAQTRRRPTPSGPASSRRSCTTPGRPSGGPTRR 684
GP TRR P P GP + R P P G PTRR
Sbjct: 251 GPP-TRRPPGPPGPPTRR-----PPGPPGPPTRR 278
>U39644-6|AAO44907.1| 300|Caenorhabditis elegans Collagen protein
170 protein.
Length = 300
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = +1
Query: 583 GPAQTRRRPTPSGPASSRRSCTTPGRP-SGGP 675
GPA P P GPA S PG P S GP
Sbjct: 223 GPAGAPGAPGPDGPAGPAGSPGAPGNPGSQGP 254
>U39644-5|AAO44906.1| 300|Caenorhabditis elegans Collagen protein
169 protein.
Length = 300
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = +1
Query: 583 GPAQTRRRPTPSGPASSRRSCTTPGRP-SGGP 675
GPA P P GPA S PG P S GP
Sbjct: 223 GPAGAPGAPGPDGPAGPAGSPGAPGNPGSQGP 254
>U39644-4|AAA80357.2| 301|Caenorhabditis elegans Collagen protein
168 protein.
Length = 301
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = +1
Query: 583 GPAQTRRRPTPSGPASSRRSCTTPGRP-SGGP 675
GPA P P GPA S PG P S GP
Sbjct: 224 GPAGAPGAPGPDGPAGPAGSPGAPGNPGSQGP 255
>U39644-3|AAA80358.2| 301|Caenorhabditis elegans Collagen protein
167 protein.
Length = 301
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = +1
Query: 583 GPAQTRRRPTPSGPASSRRSCTTPGRP-SGGP 675
GPA P P GPA S PG P S GP
Sbjct: 224 GPAGAPGAPGPDGPAGPAGSPGAPGNPGSQGP 255
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,656,742
Number of Sequences: 27780
Number of extensions: 379911
Number of successful extensions: 1465
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1282
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1452
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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