Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0980
         (730 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81030-1|CAB02703.1| 1204|Caenorhabditis elegans Hypothetical pr...    30   1.5  
Z99709-1|CAB16858.1|  488|Caenorhabditis elegans Hypothetical pr...    28   5.9  
Z92806-3|CAB07256.1|  202|Caenorhabditis elegans Hypothetical pr...    28   7.9  

>Z81030-1|CAB02703.1| 1204|Caenorhabditis elegans Hypothetical
           protein C01G10.1 protein.
          Length = 1204

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 22/94 (23%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
 Frame = +1

Query: 316 FENLM-YVRKHIEEFPKMSDIHNRNTRNKHKLVVPMSRLHKIRNSFGCLSVRLYNKIPQD 492
           F N M ++ ++++    +++    N     KL+V M    ++R    CLS     +  Q 
Sbjct: 507 FHNFMTHLSQNLKNIKVITNKSLPNDTKIDKLLVEMLDTSQLRGISKCLS----QEFMQP 562

Query: 493 VQNLHIHRFKKTIKEHLCNKAYYKVNDYLEDCTK 594
           ++ L +     T+++   NK   K+N YL++  K
Sbjct: 563 LRVLEVIEAMITVRQFAGNKTVLKMNQYLDELAK 596


>Z99709-1|CAB16858.1|  488|Caenorhabditis elegans Hypothetical
           protein C47B2.1 protein.
          Length = 488

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 20/75 (26%), Positives = 37/75 (49%)
 Frame = +1

Query: 229 RAIYNMHSRESLREKFKEIKVLTMPSQYIFENLMYVRKHIEEFPKMSDIHNRNTRNKHKL 408
           R IYN   + +LR+ F  +K+ +   +    +  ++ +  +EF  + DI +R    K+KL
Sbjct: 233 RTIYNKRLQFALRKLFVVMKLPSAQIEEFKLDFDFMGRGSDEFEDIYDIGSRRVSFKNKL 292

Query: 409 VVPMSRLHKIRNSFG 453
           +   + L  I   FG
Sbjct: 293 L--SASLRTIDKEFG 305


>Z92806-3|CAB07256.1|  202|Caenorhabditis elegans Hypothetical
           protein K10G4.3 protein.
          Length = 202

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 24/108 (22%), Positives = 54/108 (50%), Gaps = 1/108 (0%)
 Frame = +1

Query: 265 REKFKEIKVLTMPSQYIFENLMYVRKHIEEFPKMSDIHNRNTRNKHKLVVPMSR-LHKIR 441
           +    + + + + +++  EN+    + I EF +  D+ NRN +N  K+   + +   KIR
Sbjct: 84  KHNLDDAREILIANKWKLENIEESYEKISEFQRQLDL-NRNNQNNDKIYEAIKKEKEKIR 142

Query: 442 NSFGCLSVRLYNKIPQDVQNLHIHRFKKTIKEHLCNKAYYKVNDYLED 585
                 +V   N+  +D +N+  + F+ T++ H  N    ++ D++E+
Sbjct: 143 K-----NVYERNEQLRDFKNIP-YGFQPTLELH--NLMQDQIEDFIEE 182


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,228,702
Number of Sequences: 27780
Number of extensions: 323848
Number of successful extensions: 851
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 851
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)