Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0978
         (791 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ370046-1|ABD18607.1|  125|Anopheles gambiae putative secreted ...    27   0.88 
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    24   4.7  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    24   6.2  

>DQ370046-1|ABD18607.1|  125|Anopheles gambiae putative secreted
           polypeptide protein.
          Length = 125

 Score = 26.6 bits (56), Expect = 0.88
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = +3

Query: 345 RCPYKQCWCCCSFESR*EDKRRI*NTFWCEPPRPLLS 455
           RC Y +C+C   F       R I   F   PP P+LS
Sbjct: 82  RC-YAECYCASGFVREYPGGRCIPKLFCQRPPLPILS 117


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +1

Query: 619  YCNSKLMNAYFMRSLAAKLRNSGVDV 696
            Y  S+     FMR+  A +RNS V+V
Sbjct: 1368 YAGSQRRQEQFMRNAGAGIRNSDVNV 1393


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.8 bits (49), Expect = 6.2
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -2

Query: 688  PQNFSILQLMIS*SMHSLVWSCNNRGCDDRFC 593
            PQ+ S +Q     ++H  V +    GC DR C
Sbjct: 1096 PQDMSEVQATAELTIHRYVPARCGAGCQDRVC 1127


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 866,940
Number of Sequences: 2352
Number of extensions: 17024
Number of successful extensions: 69
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 69
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83160600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)