Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0978
         (791 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    60   2e-11
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    27   0.20 
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    23   4.3  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    22   5.7  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   7.5  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   9.9  

>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 60.5 bits (140), Expect = 2e-11
 Identities = 43/161 (26%), Positives = 85/161 (52%), Gaps = 1/161 (0%)
 Frame = +1

Query: 112 LITGANSGIGLETAKALVKRKARVIFACRDIAKAKEVIAAIREEQPNGGEMIPMQLDLSS 291
           L+TGANSGIG    + LV +  +VI     + K K ++  ++ +    G+++P+Q DLS+
Sbjct: 11  LVTGANSGIGKCLIECLVGKGMKVIGIAPQVDKMKTLVEELKSKP---GKLVPLQCDLSN 67

Query: 292 FESIENFVDIIKAGFHKIDVLINNAGVVVPLN-QDEKTKEGFEIHFGVNHLGHFYLTNLL 468
              I   ++ ++     ID+LINNA + + +  Q+++  +  +I F +N LG   +   +
Sbjct: 68  QNDILKVIEWVEKNLGAIDILINNATINIDVTLQNDEVLDWKKI-FDINLLGLTCMIQEV 126

Query: 469 LDHLKRATPSRIVIVSSTLHEKGKIDFDDLNLRSEIELAKK 591
           L  +K+   +  +IV+  +++   ++   +N      LA K
Sbjct: 127 LKLMKKKGINNGIIVN--INDASGLNLLPMNRNRPAYLASK 165


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 27.1 bits (57), Expect = 0.20
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = -2

Query: 130 CLHRLSERFCLSDMYY*YICPNFWISVYVLIQSP 29
           C++  S   C++   + Y+CP   +S + L+ SP
Sbjct: 185 CIYVQSINLCMAGRLFGYLCPGMALSQFDLMGSP 218


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +1

Query: 637 MNAYFMRSLAAKLRNSGVD 693
           M++YF  S    LRN GV+
Sbjct: 1   MSSYFANSYIPDLRNGGVE 19


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 20/69 (28%), Positives = 34/69 (49%)
 Frame = +1

Query: 217 EVIAAIREEQPNGGEMIPMQLDLSSFESIENFVDIIKAGFHKIDVLINNAGVVVPLNQDE 396
           + I  + E Q N  ++  ++L   S  + + FV  + AGF      ++NA   + LNQD 
Sbjct: 269 DFINMLMELQKNPQKLENIKLT-DSLIAAQAFVFFL-AGFETSSTTMSNALYELALNQDV 326

Query: 397 KTKEGFEIH 423
           + K   EI+
Sbjct: 327 QKKLREEIN 335


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -1

Query: 248 GCSSRIAAITSFAFAMSLHAKITRAFLLTKA 156
           GCSS+    TS AFA       +   LL +A
Sbjct: 894 GCSSKNGEPTSAAFAQGFATAASSPGLLERA 924


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 9/36 (25%), Positives = 17/36 (47%)
 Frame = +2

Query: 137 SDLKQLKPWLKEKPALSLHAETLQRRKKLLPQYERN 244
           ++ +  KPWL +   +S   +    RK + P +  N
Sbjct: 113 TEYRFFKPWLGDGLLISTGQKWRNHRKLIAPTFHLN 148


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 228,629
Number of Sequences: 438
Number of extensions: 5396
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25003662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)