Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0977
(783 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 292 4e-80
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 278 6e-76
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 278 7e-76
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 246 3e-66
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 219 5e-58
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 122 8e-29
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 104 1e-23
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 71 2e-13
SPAC24H6.13 |||DUF221 family protein|Schizosaccharomyces pombe|c... 26 5.3
SPBC27.03 |meu25||sequence orphan|Schizosaccharomyces pombe|chr ... 25 9.3
SPAC16C9.06c |upf1||ATP-dependent RNA helicase Upf1|Schizosaccha... 25 9.3
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 292 bits (716), Expect = 4e-80
Identities = 139/185 (75%), Positives = 160/185 (86%)
Frame = +1
Query: 226 GTVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTN 405
GTVIGIDLGTTYSCV V KNGRVEIIANDQGNRITPSYVAFT+D ERL+G+AAKNQ +N
Sbjct: 35 GTVIGIDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFTED-ERLVGEAAKNQAPSN 93
Query: 406 PENTVFDAKRLIGREWSDQTVQHDVKFFPFKVVEKNSKPHVQVQTSQGDKVFAPEEISAM 585
PENT+FD KRLIGR++ ++T+ D+K FPF +V ++P V+V K F PEEISAM
Sbjct: 94 PENTIFDIKRLIGRKFDEKTMAKDIKSFPFHIVNDKNRPLVEVNVGGKKKKFTPEEISAM 153
Query: 586 VLTKMKETAEAYLGKKVTHAVGTVPAYFNDAQRQATKDAGTISGLNVMRIINEPTAAAIA 765
+L+KMK+TAEAYLGK VTHAV TVPAYFNDAQRQATKDAGTI+GLNV+RI+NEPTAAAIA
Sbjct: 154 ILSKMKQTAEAYLGKPVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVIRIVNEPTAAAIA 213
Query: 766 YGLDK 780
YGLDK
Sbjct: 214 YGLDK 218
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 278 bits (682), Expect = 6e-76
Identities = 136/182 (74%), Positives = 153/182 (84%)
Frame = +1
Query: 235 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPEN 414
IGIDLGTTYSCVG + N RVEIIANDQGNR TPSYVAFT D ERLIGDAAKNQ+ NP N
Sbjct: 5 IGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPHN 63
Query: 415 TVFDAKRLIGREWSDQTVQHDVKFFPFKVVEKNSKPHVQVQTSQGDKVFAPEEISAMVLT 594
T+FDAKRLIGR++ D VQ D+K +PFKV+ K+ KP +QV+ K F PEEIS+MVL
Sbjct: 64 TIFDAKRLIGRKFDDPEVQSDMKHWPFKVISKDGKPVLQVEYKGETKTFTPEEISSMVLM 123
Query: 595 KMKETAEAYLGKKVTHAVGTVPAYFNDAQRQATKDAGTISGLNVMRIINEPTAAAIAYGL 774
KM+ETAEAYLG KVT AV TVPAYFND+QRQATKDAG I+GLNV+RIINEPTAAAIAYGL
Sbjct: 124 KMRETAEAYLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGL 183
Query: 775 DK 780
D+
Sbjct: 184 DR 185
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 278 bits (681), Expect = 7e-76
Identities = 135/182 (74%), Positives = 154/182 (84%)
Frame = +1
Query: 235 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPEN 414
IGIDLGTTYSCVG + N RVEIIANDQGNR TPSYVAFT D ERLIGDAAKNQ+ NP N
Sbjct: 5 IGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPHN 63
Query: 415 TVFDAKRLIGREWSDQTVQHDVKFFPFKVVEKNSKPHVQVQTSQGDKVFAPEEISAMVLT 594
T+FDAKRLIGR ++D VQ D+K +PFKV+EK+ KP +QV+ K F PEEIS+MVL
Sbjct: 64 TIFDAKRLIGRRFNDPEVQSDMKHWPFKVIEKDGKPLIQVEFKGETKTFTPEEISSMVLL 123
Query: 595 KMKETAEAYLGKKVTHAVGTVPAYFNDAQRQATKDAGTISGLNVMRIINEPTAAAIAYGL 774
KM+E+AEA+LG KVT AV TVPAYFND+QRQATKDAG I+GLNV+RIINEPTAAAIAYGL
Sbjct: 124 KMRESAEAFLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGL 183
Query: 775 DK 780
D+
Sbjct: 184 DR 185
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 246 bits (602), Expect = 3e-66
Identities = 122/183 (66%), Positives = 141/183 (77%)
Frame = +1
Query: 235 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPEN 414
IGIDLGTTYSCV V++ VEII NDQG R TPS+VAFT+ ERL+GDAAKNQ NP N
Sbjct: 9 IGIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFTET-ERLVGDAAKNQAAMNPRN 67
Query: 415 TVFDAKRLIGREWSDQTVQHDVKFFPFKVVEKNSKPHVQVQTSQGDKVFAPEEISAMVLT 594
TVFDAKRLIGR + D Q D+K +PFKV++ N P ++V K F +EISAMVLT
Sbjct: 68 TVFDAKRLIGRRYEDPETQKDIKHWPFKVIDNNGIPTIEVNYLGEKKQFTAQEISAMVLT 127
Query: 595 KMKETAEAYLGKKVTHAVGTVPAYFNDAQRQATKDAGTISGLNVMRIINEPTAAAIAYGL 774
KMKE +EA L K+V AV TVPAYF+D+QR ATKDAG I+GLNV+RIINEPTAAAIAYGL
Sbjct: 128 KMKEISEAKLNKRVEKAVITVPAYFSDSQRAATKDAGAIAGLNVLRIINEPTAAAIAYGL 187
Query: 775 DKK 783
D K
Sbjct: 188 DAK 190
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 219 bits (534), Expect = 5e-58
Identities = 107/186 (57%), Positives = 139/186 (74%)
Frame = +1
Query: 226 GTVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTN 405
G VIGIDLGTT SC+ + + ++IAN +G R TPS VAFT+DGERL+G +AK Q N
Sbjct: 50 GPVIGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKRQAVIN 109
Query: 406 PENTVFDAKRLIGREWSDQTVQHDVKFFPFKVVEKNSKPHVQVQTSQGDKVFAPEEISAM 585
PENT F KRLIGR + + VQ D+K P+K+VE +S ++ ++G K ++P +I
Sbjct: 110 PENTFFATKRLIGRRFKEPEVQRDIKEVPYKIVE-HSNGDAWLE-ARG-KTYSPSQIGGF 166
Query: 586 VLTKMKETAEAYLGKKVTHAVGTVPAYFNDAQRQATKDAGTISGLNVMRIINEPTAAAIA 765
+L+KM+ETA YLGK V +AV TVPAYFND+QRQATK AG I+GLNV+R++NEPTAAA+A
Sbjct: 167 ILSKMRETASTYLGKDVKNAVVTVPAYFNDSQRQATKAAGAIAGLNVLRVVNEPTAAALA 226
Query: 766 YGLDKK 783
YGLDKK
Sbjct: 227 YGLDKK 232
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 122 bits (293), Expect = 8e-29
Identities = 66/184 (35%), Positives = 107/184 (58%), Gaps = 1/184 (0%)
Frame = +1
Query: 232 VIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPE 411
V+GID G + + + V +N +++I N+ NR TPS V++ + R +G+AAK+ +N
Sbjct: 7 VVGIDFGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYGERS-RFLGEAAKSAEASNFR 65
Query: 412 NTVFDAKRLIGREWSDQTVQH-DVKFFPFKVVEKNSKPHVQVQTSQGDKVFAPEEISAMV 588
NTV KRL GR + D ++ + F K+ E + +VQ + F+ ++ A
Sbjct: 66 NTVGSLKRLAGRTYDDPEIKDIESNFISAKLTEVDGFVGAKVQYLNEETAFSNIQLIAAY 125
Query: 589 LTKMKETAEAYLGKKVTHAVGTVPAYFNDAQRQATKDAGTISGLNVMRIINEPTAAAIAY 768
TK+K AEA L V+ V ++PA+F D QR+A +A I+GLN +R++N+ AAA+ Y
Sbjct: 126 FTKIKAIAEAELIGSVSDVVISIPAWFTDIQRRALLEAANIAGLNPLRLMNDNAAAALTY 185
Query: 769 GLDK 780
G+ K
Sbjct: 186 GITK 189
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 104 bits (250), Expect = 1e-23
Identities = 62/183 (33%), Positives = 102/183 (55%), Gaps = 4/183 (2%)
Frame = +1
Query: 229 TVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNP 408
TVIGI G S + ++G+ +++AN++GNR PS +++ D E G A+ QL N
Sbjct: 25 TVIGISFGNQNSSIAFNRDGKTDVLANEEGNRQIPSILSYHGDQE-YHGVQARGQLVRNA 83
Query: 409 ENTVFDAKRLIGREWSDQTVQH-DVKFFPFKVVEK-NSKPHVQV--QTSQGDKVFAPEEI 576
+N+V + + L+G+ + T+ H P V + K VQ ++ +K+ E
Sbjct: 84 DNSVTNFRDLLGKSHDELTLHHCHYSANPVNVEGQIGFKITVQEDEESDPKEKILTAHEA 143
Query: 577 SAMVLTKMKETAEAYLGKKVTHAVGTVPAYFNDAQRQATKDAGTISGLNVMRIINEPTAA 756
S L ++ E+AE +LG KV V +VP YF DAQR+A + A +GL V+++I++P A
Sbjct: 144 SVRHLRRLTESAEDFLGTKVNGCVMSVPVYFTDAQRKALESAANEAGLPVLQLIHDPAAV 203
Query: 757 AIA 765
+A
Sbjct: 204 ILA 206
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 70.9 bits (166), Expect = 2e-13
Identities = 54/187 (28%), Positives = 89/187 (47%), Gaps = 3/187 (1%)
Frame = +1
Query: 229 TVIGIDLGTTYSCVGVYKNG-RVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTN 405
+V+ ID GT ++ + K G +EI+ R S VAF + ER+ G A N T
Sbjct: 23 SVLAIDYGTEWTKAALIKPGIPLEIVLTKDTRRKEQSAVAF-KGNERIFGVDASNLATRF 81
Query: 406 PENTVFDAKRLIGREWSDQT-VQHDVKFFPFKVVEKNSKPHVQVQTSQGDKV-FAPEEIS 579
P +++ + K L+ + VQ +P + +N + + D+ ++ EEI
Sbjct: 82 PAHSIRNVKELLDTAGLESVLVQKYQSSYPAIQLVENEETTSGISFVISDEENYSLEEII 141
Query: 580 AMVLTKMKETAEAYLGKKVTHAVGTVPAYFNDAQRQATKDAGTISGLNVMRIINEPTAAA 759
AM + AE +K+T V TVP +FN+ QR +A I +V+ +I++ A A
Sbjct: 142 AMTMEHYISLAEEMAHEKITDLVLTVPPHFNELQRSILLEAARILNKHVLALIDDNVAVA 201
Query: 760 IAYGLDK 780
I Y L +
Sbjct: 202 IEYSLSR 208
>SPAC24H6.13 |||DUF221 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 871
Score = 26.2 bits (55), Expect = 5.3
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = -1
Query: 726 YIKTRNCTSIFGCLTLSIIEISRHSTNSMSNL-FSKVSLSSLLHFSQNHSRDFFRSKHF- 553
Y+ T I GCL L I + ++TN + F +S S++ + ++ ++ F F
Sbjct: 92 YLFTFGALCILGCLVLFPILLPVNATNGVGEKGFDILSFSNVKNHNRFYAHVFLSWLFFG 151
Query: 552 VAL*SLYLNMRFAVLF 505
+ +Y +R+ V+F
Sbjct: 152 FTIFIIYRELRYYVIF 167
>SPBC27.03 |meu25||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 622
Score = 25.4 bits (53), Expect = 9.3
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1
Query: 358 GERLIGDAAKNQLTTNPENT 417
GE ++ D+ N TNP+NT
Sbjct: 6 GENIVSDSIVNMELTNPDNT 25
>SPAC16C9.06c |upf1||ATP-dependent RNA helicase
Upf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 925
Score = 25.4 bits (53), Expect = 9.3
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -2
Query: 350 VKATYEGVMRFPWS 309
+K TYEG +R PWS
Sbjct: 284 MKLTYEGELRAPWS 297
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,076,993
Number of Sequences: 5004
Number of extensions: 62392
Number of successful extensions: 183
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 175
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 379359666
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -