Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0973
         (762 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    26   0.44 
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    26   0.44 
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    26   0.44 
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    25   0.58 
DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channe...    22   5.4  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          22   5.4  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   7.1  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   9.4  

>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 25.8 bits (54), Expect = 0.44
 Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
 Frame = +1

Query: 520 TIRERSDQQIFTQSGNKLYRS--HCWEPARERNGGSRF 627
           T+R R   Q        LY+S  HCW    +  GG+ F
Sbjct: 235 TVRRRMMMQSGRAKSEILYKSTLHCWATIYKTEGGNAF 272


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 25.8 bits (54), Expect = 0.44
 Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
 Frame = +1

Query: 520 TIRERSDQQIFTQSGNKLYRS--HCWEPARERNGGSRF 627
           T+R R   Q        LY+S  HCW    +  GG+ F
Sbjct: 235 TVRRRMMMQSGRAKSEILYKSTLHCWATIYKTEGGNAF 272


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 25.8 bits (54), Expect = 0.44
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +2

Query: 458 SNTHTLVDRSKYTGPFLPGYQLLEKDPISKYLPKVE 565
           S+TH+ + RS   GP +   QL   D I  Y+ + E
Sbjct: 700 SSTHSTLARSLMEGPRMTAEQLKRTDIIHNYIMRGE 735


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 25.4 bits (53), Expect = 0.58
 Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = +2

Query: 335 VENLDYILEYARKQGAKVVKDLW--EEKDQYGVVRMATLKTYGSNTHTLVDRSKYTGP 502
           +++L+ +   A+KQ  KV+ DL      DQ+   +M+   T  +NT+   D   +  P
Sbjct: 97  IKDLEDLTAEAKKQNLKVILDLVPNHTSDQHKWFQMSINNTNNNNTNKYKDYYIWVDP 154


>DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channel
           protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 7/19 (36%), Positives = 14/19 (73%), Gaps = 1/19 (5%)
 Frame = +3

Query: 612 WRK-PLRGTKDASIPQILV 665
           W++ P+RG ++A +PQ  +
Sbjct: 193 WKETPVRGVEEAELPQFTI 211


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 12/43 (27%), Positives = 19/43 (44%)
 Frame = +1

Query: 526 RERSDQQIFTQSGNKLYRSHCWEPARERNGGSRFVVRKMPPFH 654
           RER  +    +   + YR    E +R+R G  R    ++ P H
Sbjct: 291 REREQKSYKNEREYREYRETSRERSRDRRGRGRSREHRIIPSH 333


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +2

Query: 527 EKDPISKYLPKVEINFIDHIVGNQP 601
           E++ + + L  + +N I HI+ N P
Sbjct: 41  EENVVEELLSPLTLNRITHILANSP 65


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -2

Query: 146 RSNWPLVWRSKPKT 105
           R+ WP  W+ +P T
Sbjct: 578 RALWPTEWKVRPST 591


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 232,607
Number of Sequences: 438
Number of extensions: 5563
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23789892
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)