Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0972
         (714 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68118-5|CAA92185.1|  245|Caenorhabditis elegans Hypothetical pr...    32   0.47 
Z96102-3|CAE17868.1|  686|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z81491-16|CAE17747.1|  686|Caenorhabditis elegans Hypothetical p...    30   1.9  
U51997-4|AAG24068.1|  115|Caenorhabditis elegans Hypothetical pr...    28   5.8  
AC024798-10|AAK29912.1|  254|Caenorhabditis elegans Hypothetical...    28   7.6  

>Z68118-5|CAA92185.1|  245|Caenorhabditis elegans Hypothetical
           protein R01E6.5 protein.
          Length = 245

 Score = 31.9 bits (69), Expect = 0.47
 Identities = 12/46 (26%), Positives = 23/46 (50%)
 Frame = -2

Query: 617 LTHDGHQRCSLLYVRNHQAQRGSSYHVRHHHRGSRAGSCGHQCEGQ 480
           ++H  H+  S  Y    ++Q G ++H +  H G  A   G+  +G+
Sbjct: 5   ISHSSHENASGKYGYGDESQHGKNFHQKAEHSGHEAKEKGYSQDGK 50


>Z96102-3|CAE17868.1|  686|Caenorhabditis elegans Hypothetical
           protein D1086.9 protein.
          Length = 686

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = -2

Query: 560 QRGSSYHVRHHHRGSR-AGSCGHQCEGQPRSKHSRIWGEPG 441
           Q+G+    +  HRGSR AG  G Q   Q R + SR  GE G
Sbjct: 477 QKGTQQADQEQHRGSRAAGEKGTQQLDQERHRGSRAAGEKG 517



 Score = 27.9 bits (59), Expect = 7.6
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = -2

Query: 560 QRGSSYHVRHHHRGSR-AGSCGHQCEGQPRSKHSRIWGEPG 441
           Q+G+    +  HRGSR AG  G Q   Q + + SR  G+ G
Sbjct: 323 QKGTQQADQEQHRGSRAAGEKGTQQADQEQHRGSRAAGQKG 363



 Score = 27.9 bits (59), Expect = 7.6
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = -2

Query: 560 QRGSSYHVRHHHRGSR-AGSCGHQCEGQPRSKHSRIWGEPG 441
           Q+G+    +  HRGSR AG  G Q   Q + + SR  G+ G
Sbjct: 361 QKGTQQADQEQHRGSRAAGEKGTQQADQEQHRGSRAAGQKG 401


>Z81491-16|CAE17747.1|  686|Caenorhabditis elegans Hypothetical
           protein D1086.9 protein.
          Length = 686

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = -2

Query: 560 QRGSSYHVRHHHRGSR-AGSCGHQCEGQPRSKHSRIWGEPG 441
           Q+G+    +  HRGSR AG  G Q   Q R + SR  GE G
Sbjct: 477 QKGTQQADQEQHRGSRAAGEKGTQQLDQERHRGSRAAGEKG 517



 Score = 27.9 bits (59), Expect = 7.6
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = -2

Query: 560 QRGSSYHVRHHHRGSR-AGSCGHQCEGQPRSKHSRIWGEPG 441
           Q+G+    +  HRGSR AG  G Q   Q + + SR  G+ G
Sbjct: 323 QKGTQQADQEQHRGSRAAGEKGTQQADQEQHRGSRAAGQKG 363



 Score = 27.9 bits (59), Expect = 7.6
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = -2

Query: 560 QRGSSYHVRHHHRGSR-AGSCGHQCEGQPRSKHSRIWGEPG 441
           Q+G+    +  HRGSR AG  G Q   Q + + SR  G+ G
Sbjct: 361 QKGTQQADQEQHRGSRAAGEKGTQQADQEQHRGSRAAGQKG 401


>U51997-4|AAG24068.1|  115|Caenorhabditis elegans Hypothetical
           protein F19G12.3 protein.
          Length = 115

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 4/62 (6%)
 Frame = +1

Query: 94  HIFLCFRCSSLAPCWPPPTLVFCHTTTLRQFRPRASSVMM----PRHTMPRLITPLLIMP 261
           + F  +R     P WP   LVF    +  QF      ++     PRH+  R   PL I P
Sbjct: 42  YFFWKYRIRLTRPNWP---LVFLRGNSSNQFPIELIELICKSPHPRHSTFRHTPPLYISP 98

Query: 262 HP 267
           HP
Sbjct: 99  HP 100


>AC024798-10|AAK29912.1|  254|Caenorhabditis elegans Hypothetical
           protein Y48G9A.12 protein.
          Length = 254

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 12/42 (28%), Positives = 17/42 (40%)
 Frame = -2

Query: 566 QAQRGSSYHVRHHHRGSRAGSCGHQCEGQPRSKHSRIWGEPG 441
           QA    ++H  H H    A   G QC G P    +++    G
Sbjct: 89  QAPAAGTFHYNHTHTRFLAKMTGWQCVGSPAETQNKMTSSAG 130


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,867,317
Number of Sequences: 27780
Number of extensions: 264447
Number of successful extensions: 725
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 720
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)