Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0971
(319 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 8e-04
SB_46036| Best HMM Match : PSRT (HMM E-Value=1) 31 0.15
SB_39786| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.20
SB_23556| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.47
SB_41435| Best HMM Match : Cu2_monoox_C (HMM E-Value=4e-36) 29 0.62
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.82
SB_43189| Best HMM Match : PGAMP (HMM E-Value=2.1) 29 0.82
SB_19124| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.4
SB_9087| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.4
SB_20899| Best HMM Match : RRM_1 (HMM E-Value=2.3e-15) 28 1.9
SB_31178| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.9
SB_28630| Best HMM Match : DUF1665 (HMM E-Value=3.4) 27 2.5
SB_31697| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.3
SB_26402| Best HMM Match : K-box (HMM E-Value=1) 27 3.3
SB_59620| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.3
SB_51968| Best HMM Match : PT (HMM E-Value=0.54) 27 3.3
SB_43996| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.3
SB_32907| Best HMM Match : Gly_radical (HMM E-Value=6) 27 3.3
SB_49940| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.4
SB_5854| Best HMM Match : Pkinase_Tyr (HMM E-Value=4.3e-17) 27 4.4
SB_28880| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.4
SB_12627| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.4
SB_2236| Best HMM Match : PkinA_anch (HMM E-Value=3.3) 27 4.4
SB_46160| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.8
SB_40971| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.8
SB_44956| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.8
SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35) 26 5.8
SB_53103| Best HMM Match : DUF1388 (HMM E-Value=0.29) 26 7.6
SB_39808| Best HMM Match : EGF_CA (HMM E-Value=6.3e-35) 26 7.6
SB_39039| Best HMM Match : Drf_FH1 (HMM E-Value=6.4) 26 7.6
SB_24641| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.6
SB_11351| Best HMM Match : LRV (HMM E-Value=6) 26 7.6
SB_6936| Best HMM Match : TP2 (HMM E-Value=1.1) 26 7.6
SB_2776| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.6
SB_14911| Best HMM Match : Amelogenin (HMM E-Value=1.7) 26 7.6
>SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 336
Score = 39.1 bits (87), Expect = 8e-04
Identities = 23/63 (36%), Positives = 28/63 (44%)
Frame = -1
Query: 304 RCRAVSRDIRTTTEARRPGTARNTRRPKPTELSACCRERSETPRHRNKPSRPVWSRRSPH 125
R R+ SR R +R P R +R P P S R RS +PR R+ SR RR
Sbjct: 223 RSRSRSRSPRRRRRSRSPRRRRRSRSPSPHHRSHRSRSRSRSPRRRHSRSRSPTHRRHRS 282
Query: 124 HFH 116
H
Sbjct: 283 RSH 285
>SB_46036| Best HMM Match : PSRT (HMM E-Value=1)
Length = 878
Score = 31.5 bits (68), Expect = 0.15
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = -1
Query: 313 PPGRCRAVSRDIRTTTEARRPGTARNTRRPKPTELSACCRERSETPRHRN-KPSR 152
P GR ++ SR T R+ T+ N R P P S R S +PR R+ PSR
Sbjct: 534 PVGRTKSPSRSY---TSPRQRRTSPNNRSPPPRRRSPSPRRPSPSPRRRSTSPSR 585
>SB_39786| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 294
Score = 31.1 bits (67), Expect = 0.20
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Frame = -1
Query: 289 SRDIRTTTEARRPGTARNTRRPKPTELSACCR----ERSETPRHRNKPSRPVWSRRSPHH 122
+RD R T R P ++ R P+P++ R +R P + + RP +R P H
Sbjct: 191 NRDTRDTINNRHPRPSQQQRHPRPSQQQRHPRPSQQQRYPRPSQQQRQPRPSQQQRYPRH 250
>SB_23556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 671
Score = 29.9 bits (64), Expect = 0.47
Identities = 15/59 (25%), Positives = 31/59 (52%)
Frame = +1
Query: 91 SSSISKYYNGNGVDSVETKQVEKVYSGDGASLSAPGSKRSALSASDAECFSLCLGAGPL 267
++ +S+Y ++++ + ++++Y + P S +A SD FSLC+ GPL
Sbjct: 137 NTRLSEYLESRDCEAMDVR-LQRLYEHELVMYRLPESSATATPLSDLFDFSLCMCYGPL 194
>SB_41435| Best HMM Match : Cu2_monoox_C (HMM E-Value=4e-36)
Length = 821
Score = 29.5 bits (63), Expect = 0.62
Identities = 21/63 (33%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Frame = -1
Query: 313 PPGRCRAVSRDI-RTTTEARRPGTARNTRRPKPTELSACCRERSETPRHRNKPSRPVWSR 137
PPGR R R T E R PG N +RP + C T + R P R +
Sbjct: 313 PPGRVTNKKRPPGRVTNEKRPPGRVTNEKRPPGKVTNQKCPPSRVTNKKR-PPGRITNEK 371
Query: 136 RSP 128
R P
Sbjct: 372 RPP 374
Score = 29.5 bits (63), Expect = 0.62
Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Frame = -1
Query: 313 PPGRCRAVSRDI-RTTTEARRPGTARNTRRPKPTELSACCRERSETPRHRNKPSRPVWSR 137
PPGR R R T + R PG N +RP P ++ R + P R +
Sbjct: 363 PPGRITNEKRPPGRVTNQKRPPGRVTNKKRP-PGRITNQKRPPGRVTNQKRPPGRVTNKK 421
Query: 136 RSP 128
R P
Sbjct: 422 RPP 424
Score = 29.1 bits (62), Expect = 0.82
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = -1
Query: 313 PPGRCRAVSRDI-RTTTEARRPGTARNTRRPKPTELSACCRERSETPRHRNKPSRPVWSR 137
PPGR R R T + R PG N +RP P ++ R + + PSR +
Sbjct: 303 PPGRVTNQKRPPGRVTNKKRPPGRVTNEKRP-PGRVTNEKRPPGKVTNQKCPPSRVTNKK 361
Query: 136 RSP 128
R P
Sbjct: 362 RPP 364
Score = 29.1 bits (62), Expect = 0.82
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = -1
Query: 313 PPGRCRAVSRDI-RTTTEARRPGTARNTRRPKPTELSACCRERSETPRHRNKPSRPVWSR 137
PPGR R R T + R PG N +RP P ++ R + + PSR +
Sbjct: 403 PPGRVTNQKRPPGRVTNKKRPPGRVTNQKRP-PGRVTNEKRPPGKVTNQKCPPSRVTNKK 461
Query: 136 RSP 128
R P
Sbjct: 462 RPP 464
Score = 29.1 bits (62), Expect = 0.82
Identities = 20/63 (31%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Frame = -1
Query: 313 PPGRCRAVSRDI-RTTTEARRPGTARNTRRPKPTELSACCRERSETPRHRNKPSRPVWSR 137
PPGR R R T + R PG N +RP + C T + R P R +
Sbjct: 413 PPGRVTNKKRPPGRVTNQKRPPGRVTNEKRPPGKVTNQKCPPSRVTNKKR-PPGRETNKK 471
Query: 136 RSP 128
R P
Sbjct: 472 RPP 474
Score = 28.7 bits (61), Expect = 1.1
Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Frame = -1
Query: 313 PPGRCRAVSRDI-RTTTEARRPGTARNTRRPKPTELSACCRERSETPRHRNKPSRPVWSR 137
PPGR R R T + R PG N +RP P ++ R + P R +
Sbjct: 383 PPGRVTNKKRPPGRITNQKRPPGRVTNQKRP-PGRVTNKKRPPGRVTNQKRPPGRVTNEK 441
Query: 136 RSP 128
R P
Sbjct: 442 RPP 444
Score = 27.9 bits (59), Expect = 1.9
Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Frame = -1
Query: 313 PPGRCRAVSRDI-RTTTEARRPGTARNTRRPKPTELSACCRERSETPRHRNKPSRPVWSR 137
PPGR R R T E R PG N + P P+ ++ R + P R +
Sbjct: 323 PPGRVTNEKRPPGRVTNEKRPPGKVTNQKCP-PSRVTNKKRPPGRITNEKRPPGRVTNQK 381
Query: 136 RSP 128
R P
Sbjct: 382 RPP 384
Score = 27.9 bits (59), Expect = 1.9
Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Frame = -1
Query: 313 PPGRCRAVSRDI-RTTTEARRPGTARNTRRPKPTELSACCRERSETPRHRNKPSRPVWSR 137
PPGR R R T + R PG N +RP P ++ R + P R +
Sbjct: 373 PPGRVTNQKRPPGRVTNKKRPPGRITNQKRP-PGRVTNQKRPPGRVTNKKRPPGRVTNQK 431
Query: 136 RSP 128
R P
Sbjct: 432 RPP 434
Score = 27.9 bits (59), Expect = 1.9
Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Frame = -1
Query: 313 PPGRCRAVSRDI-RTTTEARRPGTARNTRRPKPTELSACCRERSETPRHRNKPSRPVWSR 137
PPGR R R T E R PG N + P P+ ++ R + P R +
Sbjct: 423 PPGRVTNQKRPPGRVTNEKRPPGKVTNQKCP-PSRVTNKKRPPGRETNKKRPPGRVTNKK 481
Query: 136 RSP 128
R P
Sbjct: 482 RQP 484
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 29.1 bits (62), Expect = 0.82
Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = +2
Query: 131 TPSRPNR-SRRFIPVTGRL*ALPAASAQLCRLRTPSVSRCAWAPGLCGGPDVPAHGSAP 304
TPS P+ S P T + P+ + TPS APG G P P+ SAP
Sbjct: 466 TPSTPSTPSTPSTPSTPSTPSTPSTPSTSSTPSTPSTPSTPSAPGTPGTPSTPSTPSAP 524
>SB_43189| Best HMM Match : PGAMP (HMM E-Value=2.1)
Length = 461
Score = 29.1 bits (62), Expect = 0.82
Identities = 17/57 (29%), Positives = 22/57 (38%)
Frame = -1
Query: 295 AVSRDIRTTTEARRPGTARNTRRPKPTELSACCRERSETPRHRNKPSRPVWSRRSPH 125
A+ + T RP + R R P S R +T PSRP + R PH
Sbjct: 4 ALHNTLTRTRVPSRPCSLRTVRHPHTGTKSTMAYARDDTLTRTRVPSRPSRTVRHPH 60
>SB_19124| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 224
Score = 28.3 bits (60), Expect = 1.4
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = -1
Query: 289 SRDIRTTTEARRPGTARNTRRPKPTELSACCRERSETPRHRNKPSRPVWSRRSP 128
+RD R T R P ++ R P+P++ ++R P + + RP +R P
Sbjct: 151 NRDTRDTINNRHPRPSQQQRYPRPSQ-----QQRYPRPSQQQRHPRPSQQQRHP 199
>SB_9087| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 831
Score = 28.3 bits (60), Expect = 1.4
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 236 VSRCAWAPGLCGGPDVPAHGS 298
++R W+ LCGGPD+ GS
Sbjct: 108 ITRSWWSSRLCGGPDINDDGS 128
>SB_20899| Best HMM Match : RRM_1 (HMM E-Value=2.3e-15)
Length = 876
Score = 27.9 bits (59), Expect = 1.9
Identities = 16/49 (32%), Positives = 17/49 (34%)
Frame = -3
Query: 314 PSRAVQSREQGHQDHHRGPAPRHSEKHSASEADRAERLLPGALRDAPSP 168
P R G D H GP RH H +RL P RD P
Sbjct: 134 PDRHTPPDRNGPPDRH-GPPDRHGMDHGRGRGRGRDRLSPPPHRDRGRP 181
>SB_31178| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 281
Score = 27.9 bits (59), Expect = 1.9
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -3
Query: 272 HHRGPAPRHSEKHSASEADRAER 204
H GP+ RHS H +E++ A+R
Sbjct: 123 HKEGPSSRHSNVHELNESELAKR 145
>SB_28630| Best HMM Match : DUF1665 (HMM E-Value=3.4)
Length = 428
Score = 27.5 bits (58), Expect = 2.5
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -3
Query: 308 RAVQSREQGHQDHHRGPAPRHSEKHSASEADRAER 204
R +SR H+DH PR S HS D ER
Sbjct: 205 RRSRSRSLRHEDHDDA-TPRRSRSHSLRHEDEEER 238
>SB_31697| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 518
Score = 27.1 bits (57), Expect = 3.3
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = -1
Query: 265 EARRPGTARNTRRPKPTELSACCRERSETPRHRNKPSRPVWSRRSP 128
E ++P A+ T + S+ ++ + +P + PS+P WSR +P
Sbjct: 432 EEKKPLEAKTTPNVG-SGASSAFQKNTPSPSPKTTPSKPSWSRPTP 476
>SB_26402| Best HMM Match : K-box (HMM E-Value=1)
Length = 166
Score = 27.1 bits (57), Expect = 3.3
Identities = 15/73 (20%), Positives = 33/73 (45%)
Frame = +1
Query: 49 RLSKMTMLIQQLNCSSSISKYYNGNGVDSVETKQVEKVYSGDGASLSAPGSKRSALSASD 228
+L + ++QQ++ S + VDS++ + EK + + SK+ L+++
Sbjct: 70 KLGETEYILQQMDSSVKQTAAIKEKDVDSLQQQLAEKDRRIEELNSKLESSKKDVLNSNQ 129
Query: 229 AECFSLCLGAGPL 267
+C GP+
Sbjct: 130 EKCLEKFKANGPV 142
>SB_59620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 249
Score = 27.1 bits (57), Expect = 3.3
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = -1
Query: 256 RPGTARNTRRPKPTELSACCRERSETPRHRNKPSRP 149
RP T +T ++CC P H N SRP
Sbjct: 184 RPETVCHTTLTLVNRTNSCCHTTPNLPSHLNTQSRP 219
>SB_51968| Best HMM Match : PT (HMM E-Value=0.54)
Length = 514
Score = 27.1 bits (57), Expect = 3.3
Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Frame = -1
Query: 319 VTPPGRCRAVSRDIRTTTEARRPGTARNTRR-PKPTELSACCRERSETPRHRNKPSRPVW 143
VTP + R T++ P R+ P PT+ +R T R KP++P+
Sbjct: 132 VTPKPKTTVKRRPTERPTKSLLPEEEEKERQTPTPTKAKPTTIKRRPTERPTKKPTKPLL 191
Query: 142 SRRSP 128
P
Sbjct: 192 PEVEP 196
Score = 27.1 bits (57), Expect = 3.3
Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = -1
Query: 298 RAVSRDIRTTTEARRPGTARNTRR--PKPTELSACCRERSETPRHRNKPSRPV 146
R R + T+ P R P+PT+ R+R T R KP++P+
Sbjct: 257 RPTERPTKKPTKPLLPEVEPEEERATPRPTKAKPTTRKRMPTERPTKKPTKPL 309
>SB_43996| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1056
Score = 27.1 bits (57), Expect = 3.3
Identities = 12/35 (34%), Positives = 14/35 (40%)
Frame = -3
Query: 269 HRGPAPRHSEKHSASEADRAERLLPGALRDAPSPE 165
H P+P HS+ E LP PSPE
Sbjct: 741 HSQPSPEHSQPSPEHSLPSQEHSLPSPEHSQPSPE 775
Score = 26.2 bits (55), Expect = 5.8
Identities = 14/51 (27%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Frame = -3
Query: 314 PSRAVQSREQG-HQDHHRGPAPRHSEKHSASEADRAERLLPGALRDAPSPE 165
P ++ S+E H P+P HS+ E P PSPE
Sbjct: 753 PEHSLPSQEHSLPSPEHSQPSPEHSQPSPEHSQPSPEHSQPSPEHSQPSPE 803
>SB_32907| Best HMM Match : Gly_radical (HMM E-Value=6)
Length = 390
Score = 27.1 bits (57), Expect = 3.3
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -1
Query: 307 GRCRAVSRDIRTTTEARRPGTARNTRRPKPTELSACCRERSETPR 173
G+ A + + T ARRP RRP PT + R + TPR
Sbjct: 11 GQNNATTTGVVPTPRARRPVPTPRARRPNPTTKA---RRPAPTPR 52
>SB_49940| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 569
Score = 26.6 bits (56), Expect = 4.4
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = -3
Query: 281 HQDHHRGPAPRHSEKHSASEADRAERLLPGALRDAPSPE*TFSTCLVSTESTPFP 117
H HH RH KH+A A R + D+P+ + T +S +S FP
Sbjct: 167 HPSHHHVTKSRHQTKHNAKHATRVFSI------DSPNEDSQGKTANIS-DSASFP 214
>SB_5854| Best HMM Match : Pkinase_Tyr (HMM E-Value=4.3e-17)
Length = 1850
Score = 26.6 bits (56), Expect = 4.4
Identities = 19/66 (28%), Positives = 24/66 (36%)
Frame = -1
Query: 319 VTPPGRCRAVSRDIRTTTEARRPGTARNTRRPKPTELSACCRERSETPRHRNKPSRPVWS 140
V+PP R S IR + RPG P PT + C + +R V
Sbjct: 1583 VSPPSRLPPPSLHIRPSD---RPGMTATPPPPLPTRRPSSCSRPAPQLSYRPPDVTDVLC 1639
Query: 139 RRSPHH 122
SP H
Sbjct: 1640 SNSPRH 1645
>SB_28880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 196
Score = 26.6 bits (56), Expect = 4.4
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +2
Query: 236 VSRCAWAPGLCGGPDVPAH 292
V RC GL GGP+ PAH
Sbjct: 45 VERCCRFEGLPGGPEDPAH 63
>SB_12627| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 444
Score = 26.6 bits (56), Expect = 4.4
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = +2
Query: 137 SRPNRSRRFIPVTGRL*ALPAASAQLCRLRTPSVSRCAWAPGLCGGPDVPAHGSAPPGR 313
S R +P+TGR + S++ T SVS C++ G +H SA PGR
Sbjct: 337 SNSRRLMSGVPITGRTTPMSDESSEASVSLTESVSSCSYESG--------SHLSASPGR 387
>SB_2236| Best HMM Match : PkinA_anch (HMM E-Value=3.3)
Length = 331
Score = 26.6 bits (56), Expect = 4.4
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = -2
Query: 315 PLPGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS*ALAAGSAQRRPV 172
P+P G G + PPQRP T+ V + A S +RPV
Sbjct: 15 PVPRGGA--GGANAPPQRPKVHFWFSTIDVLLVEKLGYVAKSDNKRPV 60
>SB_46160| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1488
Score = 26.2 bits (55), Expect = 5.8
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Frame = -1
Query: 265 EARRPGTARNTRRPKPTELSACCRERSETP---RHR-NKPSRPVWSRRSPHHFHCS 110
EAR G+ R P + R SE P ++R PS P +S R+P CS
Sbjct: 913 EARWCGSERQPETPVAPAKQSQMRFNSEAPLAPQYRYESPSEPRYSPRTPPETRCS 968
>SB_40971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 26.2 bits (55), Expect = 5.8
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -2
Query: 285 GTSGPPQRPGAQAQRETLGVRSRQ 214
G GPP RPG Q+ T G R ++
Sbjct: 129 GPRGPPGRPGHPGQKGTRGRRGQR 152
>SB_44956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 736
Score = 26.2 bits (55), Expect = 5.8
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = +2
Query: 164 IPVTGRL*ALPAASAQ--LCRLRTPSVSRCAWAP 259
IP +GR L +A+ LCR +P ++R AW P
Sbjct: 534 IPTSGRCSDLDTNTAKHVLCRGLSPILTRVAWRP 567
>SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35)
Length = 2049
Score = 26.2 bits (55), Expect = 5.8
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = -1
Query: 304 RCRAVSRDIRTTTEARRPGTARNTRRPKPTELSACCRERSETP 176
RC+ ++ ++ ++PG+A +PK + S R+RS +P
Sbjct: 1894 RCKTTAKALKKAKGKQKPGSATKKTKPK-QDSSKKKRKRSPSP 1935
>SB_53103| Best HMM Match : DUF1388 (HMM E-Value=0.29)
Length = 462
Score = 25.8 bits (54), Expect = 7.6
Identities = 15/62 (24%), Positives = 26/62 (41%)
Frame = -1
Query: 313 PPGRCRAVSRDIRTTTEARRPGTARNTRRPKPTELSACCRERSETPRHRNKPSRPVWSRR 134
PP + + TE G RNTRR + +L + + R R + +R ++
Sbjct: 54 PPEEGKNKKHQKKARTETPEEGKNRNTRRRQEQKLPEEGKNKKHQKRARTETTRRGQEQK 113
Query: 133 SP 128
+P
Sbjct: 114 TP 115
>SB_39808| Best HMM Match : EGF_CA (HMM E-Value=6.3e-35)
Length = 850
Score = 25.8 bits (54), Expect = 7.6
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1
Query: 169 RNKPSRPVWSRRSPHHFHC 113
+NK V S +SPHH HC
Sbjct: 589 KNKKIVSVPSGKSPHHLHC 607
>SB_39039| Best HMM Match : Drf_FH1 (HMM E-Value=6.4)
Length = 254
Score = 25.8 bits (54), Expect = 7.6
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = -3
Query: 200 LPGALR--DAPSPE*TFSTCLVSTESTPFP 117
LPGA R AP+P+ T +T L TE P P
Sbjct: 198 LPGASRAAPAPTPQPTAATPLPETEPEPEP 227
>SB_24641| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1120
Score = 25.8 bits (54), Expect = 7.6
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = +1
Query: 76 QQLNCSSSISKYYNGNGVDSVETKQVEKVYSGDGASLSAP 195
Q + S K G+G + E KQ EK GDG S P
Sbjct: 553 QPASKSKQSEKGKQGDGQPASEPKQSEKGKQGDGQPASEP 592
>SB_11351| Best HMM Match : LRV (HMM E-Value=6)
Length = 194
Score = 25.8 bits (54), Expect = 7.6
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 224 RTPSVSRCAWAPGLCGGPDVPAHGSAPPGR 313
RTP+V++ A P G P V A G PP R
Sbjct: 134 RTPAVNQRATDPHATG-PHVAADGVTPPAR 162
>SB_6936| Best HMM Match : TP2 (HMM E-Value=1.1)
Length = 256
Score = 25.8 bits (54), Expect = 7.6
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 232 RRPKPTELSACCRERSETPRHRNK 161
+R KP E R+RS +PR R++
Sbjct: 189 KRDKPRERKKVARDRSRSPRSRSR 212
>SB_2776| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1792
Score = 25.8 bits (54), Expect = 7.6
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -3
Query: 314 PSRAVQSREQGHQDHHRGPAPRHSEKH 234
P + + R +G + HHR HS+KH
Sbjct: 760 PMQHLGDRREGKRRHHRRHHHSHSQKH 786
>SB_14911| Best HMM Match : Amelogenin (HMM E-Value=1.7)
Length = 326
Score = 25.8 bits (54), Expect = 7.6
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -3
Query: 293 REQGHQDHHRGPAPRHSEKHSASEA 219
R+ G++D P PRHS H +++
Sbjct: 212 RDSGNRDRVTDPYPRHSSPHHRAQS 236
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,109,802
Number of Sequences: 59808
Number of extensions: 227304
Number of successful extensions: 892
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 871
length of database: 16,821,457
effective HSP length: 72
effective length of database: 12,515,281
effective search space used: 413004273
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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