Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0970
         (762 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_53877| Best HMM Match : Glyoxalase (HMM E-Value=0.58)               78   7e-15
SB_12899| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.8  
SB_55819| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.1  
SB_47844| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   5.5  
SB_50607| Best HMM Match : Vicilin_N (HMM E-Value=0.88)                28   9.5  
SB_5137| Best HMM Match : Phage_integrase (HMM E-Value=0.11)           28   9.5  
SB_30158| Best HMM Match : Pertactin (HMM E-Value=3.1)                 28   9.5  
SB_25237| Best HMM Match : Phage_integrase (HMM E-Value=0.2)           28   9.5  
SB_20498| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.5  

>SB_53877| Best HMM Match : Glyoxalase (HMM E-Value=0.58)
          Length = 220

 Score = 78.2 bits (184), Expect = 7e-15
 Identities = 35/64 (54%), Positives = 48/64 (75%)
 Frame = +2

Query: 569 SLASSNLAKSIAYWNGLLTLKLYEKTDKTALLGYSDDQAKLELVDIGEPINRAKAYGRIA 748
           SL  SNL+KS+ YWN LL ++++ +TD TA+LGY   Q KLELV +G+ ++   A+GRIA
Sbjct: 117 SLGVSNLSKSLEYWNKLLGMQVFSQTDTTAILGYDAKQCKLELVQVGQ-VDHGTAFGRIA 175

Query: 749 FSCP 760
           FSCP
Sbjct: 176 FSCP 179



 Score = 55.2 bits (127), Expect = 5e-08
 Identities = 27/32 (84%), Positives = 28/32 (87%)
 Frame = +2

Query: 146 MVSGRALHFVFKVADRTLTAKFYREILGMKVL 241
           M S RALHFVFKVA+RT TAKFYREILGMK L
Sbjct: 1   MASKRALHFVFKVANRTETAKFYREILGMKGL 32



 Score = 35.5 bits (78), Expect = 0.047
 Identities = 15/40 (37%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
 Frame = +2

Query: 407 GITVQSSESLKRAQTNNWPIKEH-NGLKYVEAPGGYKFYI 523
           G+T+ S + + RA+ +N+ +++  NG   V +PGGYKF++
Sbjct: 31  GLTLHSKDVVSRAKEHNYSMEQGTNGHYTVHSPGGYKFHL 70


>SB_12899| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 667

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 16/57 (28%), Positives = 25/57 (43%)
 Frame = +2

Query: 239 LRHEEFSEGCEAACNGPYANRWSKTMVGYGPEDTHFVVELTYNYGVTHYEQGNDFLG 409
           LRH  + +      N      W KT       D   +++ TY++ V H+ +  DFLG
Sbjct: 518 LRHISYDQARRRIMNWDVRMEWDKTF------DDVIILDRTYHFNVIHWYKACDFLG 568


>SB_55819| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2408

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 17/57 (29%), Positives = 25/57 (43%)
 Frame = +2

Query: 332  EDTHFVVELTYNYGVTHYEQGNDFLGITVQSSESLKRAQTNNWPIKEHNGLKYVEAP 502
            ED    VE  Y    + +E G D L   VQ S S++  +  + P  EH+      +P
Sbjct: 2278 EDEEAFVERKYTPRKSSFEDGQDKLRDNVQYSSSVRIPKRESSPTPEHSSRYLTPSP 2334


>SB_47844| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 399

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +2

Query: 632 LYEK-TDKTALLGYSDDQAKLELVDIGEPINRAKAYGR 742
           +YEK TD     GY+ D  +++ V +  P  R  AY R
Sbjct: 1   MYEKKTDIETRQGYNKDTTRIQAVSVSNPSPRTAAYFR 38


>SB_50607| Best HMM Match : Vicilin_N (HMM E-Value=0.88)
          Length = 385

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +3

Query: 36  IIIHRLNNHTNNIHSLSLHRSLNSEL 113
           +I+ RL+NH N  H LS H  +  +L
Sbjct: 79  LIVRRLHNHLNAKHKLSRHDEIYKQL 104


>SB_5137| Best HMM Match : Phage_integrase (HMM E-Value=0.11)
          Length = 834

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +3

Query: 36  IIIHRLNNHTNNIHSLSLHRSLNSEL 113
           +I+ RL+NH N  H LS H  +  +L
Sbjct: 79  LIVRRLHNHLNAKHKLSRHDEIYKQL 104


>SB_30158| Best HMM Match : Pertactin (HMM E-Value=3.1)
          Length = 426

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = -3

Query: 244 AENLHSEDFPIKFCC*SPICDFKY 173
           AEN H+E   +K CC S  CDF Y
Sbjct: 32  AENGHAE--VVKMCCESGACDFVY 53


>SB_25237| Best HMM Match : Phage_integrase (HMM E-Value=0.2)
          Length = 845

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +3

Query: 36  IIIHRLNNHTNNIHSLSLHRSLNSEL 113
           +I+ RL+NH N  H LS H  +  +L
Sbjct: 79  LIVRRLHNHLNAKHKLSRHDEIYKQL 104


>SB_20498| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 119

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = -2

Query: 356 VQQQNVYLQGHIQP--WFCSIGLHKVHCKLPRILH*TLHGGEPSFRGF 219
           +Q  NV  +G I     FC + +HKVH  +    H T++G   + R F
Sbjct: 8   MQVMNVQAKGGIALVYLFCRLPVHKVHLGVDHRKHVTVYGTRAACRAF 55


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,109,139
Number of Sequences: 59808
Number of extensions: 406629
Number of successful extensions: 874
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 806
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 873
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2082369341
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)