Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0967
         (719 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    28   0.077
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    23   2.2  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    23   2.9  
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    22   6.7  
DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    22   6.7  
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    22   6.7  
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    22   6.7  
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    22   6.7  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 28.3 bits (60), Expect = 0.077
 Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = -2

Query: 451 NRNAKKTVDKEAQIFCHNTNMAVKYDN-NNLQMLDK 347
           N++ +K + +E   FC   N  +KYD+   ++ LDK
Sbjct: 323 NQDVQKKLREEINTFCPKNNKELKYDDIKEMEYLDK 358


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 14/52 (26%), Positives = 21/52 (40%), Gaps = 7/52 (13%)
 Frame = -2

Query: 499 NWKSYVQYENDCKINKNRNAKKTVDKEAQIFC-------HNTNMAVKYDNNN 365
           N + Y +Y    K      A++   +E +I         HN N    Y+NNN
Sbjct: 51  NEREYRKYRETSKERSRDRAERERSREPKIISSLSNNTIHNNNYKYNYNNNN 102


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -2

Query: 412 IFCHNTNMAVKYDNNNLQMLDKDSCQVFLPS 320
           I C N+    +Y  NN++++ KD   +  PS
Sbjct: 330 IGCWNSEHFFEYGGNNIEIIVKDPETLQFPS 360


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 13/52 (25%), Positives = 20/52 (38%), Gaps = 7/52 (13%)
 Frame = -2

Query: 499 NWKSYVQYENDCKINKNRNAKKTVDKEAQIFC-------HNTNMAVKYDNNN 365
           N + Y +Y    K       ++   +E +I         HN N    Y+NNN
Sbjct: 51  NEREYRKYRETSKERSRDRTERERSREPKIISSLSNNTIHNNNYKYNYNNNN 102


>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 13/52 (25%), Positives = 20/52 (38%), Gaps = 7/52 (13%)
 Frame = -2

Query: 499 NWKSYVQYENDCKINKNRNAKKTVDKEAQIFC-------HNTNMAVKYDNNN 365
           N + Y +Y    K       ++   +E +I         HN N    Y+NNN
Sbjct: 52  NEREYRKYRETSKERSRDRTERERSREPKIISSLSNNTIHNNNYKYNYNNNN 103


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 13/52 (25%), Positives = 20/52 (38%), Gaps = 7/52 (13%)
 Frame = -2

Query: 499 NWKSYVQYENDCKINKNRNAKKTVDKEAQIFC-------HNTNMAVKYDNNN 365
           N + Y +Y    K       ++   +E +I         HN N    Y+NNN
Sbjct: 52  NEREYRKYRETSKERSRDRTERERSREPKIISSLSNNTIHNNNYKYNYNNNN 103


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 13/52 (25%), Positives = 20/52 (38%), Gaps = 7/52 (13%)
 Frame = -2

Query: 499 NWKSYVQYENDCKINKNRNAKKTVDKEAQIFC-------HNTNMAVKYDNNN 365
           N + Y +Y    K       ++   +E +I         HN N    Y+NNN
Sbjct: 52  NEREYRKYRETSKERSRDRTERERSREPKIISSLSNNTIHNNNYKYNYNNNN 103


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 13/52 (25%), Positives = 20/52 (38%), Gaps = 7/52 (13%)
 Frame = -2

Query: 499 NWKSYVQYENDCKINKNRNAKKTVDKEAQIFC-------HNTNMAVKYDNNN 365
           N + Y +Y    K       ++   +E +I         HN N    Y+NNN
Sbjct: 52  NEREYRKYRETSKERSRDRTERERSREPKIISSLSNNTIHNNNYKYNYNNNN 103


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,174
Number of Sequences: 438
Number of extensions: 4195
Number of successful extensions: 15
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22292145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)