Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0966
         (836 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    36   5e-04
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               23   2.6  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    22   8.1  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 35.9 bits (79), Expect = 5e-04
 Identities = 38/165 (23%), Positives = 64/165 (38%), Gaps = 9/165 (5%)
 Frame = +3

Query: 348  DVKDSNFTFKAGDTIGIIPKNPQVEVDFILNHLSLTSQADLPYTLLLGNKESKIPTHVP- 524
            D+      +K GD +G+   N    V+ IL  +      D+P  L +  K+S  P  +  
Sbjct: 743  DIASMEILYKPGDHLGVFACNRSELVEAILKRVQTPFDPDVPIELQI-QKQSHTPNGIVK 801

Query: 525  --------VKSTLRQVXXXXXXXXXXXXXXXXXAISRYTKEDNERQVLEYLSSKEGSTAY 680
                    + ++LR +                   +       E+  L  L+S      Y
Sbjct: 802  TWIAHDRYLPNSLRILLKRFLDITTPPTPNLLRYFASIATNPKEQAQLNLLASDPA--VY 859

Query: 681  KTHILNKQINILDIFTLFPSCKPPIEVLLSYLPKLLPRPYSIVNS 815
            +     K  N++++   FPS +P   +LL +L  L PR YSI +S
Sbjct: 860  EDWRHWKFPNLVEVLDEFPSVRPFAPLLLLHLTPLQPRFYSISSS 904


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 17/52 (32%), Positives = 23/52 (44%)
 Frame = +3

Query: 393 GIIPKNPQVEVDFILNHLSLTSQADLPYTLLLGNKESKIPTHVPVKSTLRQV 548
           GI+ KN +V+V   L HL  + Q     T  L NK   I    P +   + V
Sbjct: 67  GILDKNAEVDVQKALRHLPRSMQDS---TKKLFNKCKSIQNEDPCEKAYQLV 115


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +2

Query: 629 RKTSTRIFKQQGRIYSI*NSHIKQTNKH 712
           R+ S R  K  G +Y + N H+   N H
Sbjct: 262 RRDSRR--KNYGGVYHLDNHHVHHANHH 287


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,933
Number of Sequences: 438
Number of extensions: 4848
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26824317
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)