Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0964
         (759 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0481 - 18572206-18574314,18574591-18575185,18575304-185753...    32   0.57 
08_02_0462 + 17444726-17445135,17445271-17445546,17446523-17448461     30   2.3  
01_05_0524 + 22925354-22926229                                         28   9.3  

>07_03_0481 - 18572206-18574314,18574591-18575185,18575304-18575371,
            18577344-18577458,18578179-18578333,18578673-18580621,
            18580691-18581372,18581550-18581621,18582558-18583199,
            18583301-18583402,18585011-18585100
          Length = 2192

 Score = 31.9 bits (69), Expect = 0.57
 Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
 Frame = -1

Query: 753  ILEDSVDRRSWELRGSSDCSAN-LEISRDPSVERSGGIGRLDESTEELVSEALNTTLKPA 577
            ++++  D R  E     D SAN L I  DP+  +  G  RL EST E+   +  T   P 
Sbjct: 1308 VIKNYADDRLEEFMKLYDSSANPLRIVEDPNPVQPSGAKRLGESTAEMKQSSKKTKRYPE 1367

Query: 576  VRYHL 562
            +   L
Sbjct: 1368 IPQEL 1372


>08_02_0462 + 17444726-17445135,17445271-17445546,17446523-17448461
          Length = 874

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = -1

Query: 720 ELRGSSDCSANLEISRDPSVER 655
           EL+G  DCSA L +SR+P++ R
Sbjct: 171 ELKGKFDCSAFLSVSRNPNMMR 192


>01_05_0524 + 22925354-22926229
          Length = 291

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +2

Query: 599 RASLTNSSVLSSKRPIPPERSTEGSLLISR 688
           RA++  +S  + KRP PP R    SL++S+
Sbjct: 225 RAAMATTSHQAKKRPPPPPRDAVKSLVVSK 254


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,013,034
Number of Sequences: 37544
Number of extensions: 411124
Number of successful extensions: 976
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 976
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2027850416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)