Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0964
         (759 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC108266-1|AAI08267.1|  320|Homo sapiens heterogeneous nuclear r...    31   4.5  
AL137058-3|CAI16736.1|  320|Homo sapiens protein ( Human DNA seq...    31   4.5  
AB053446-1|BAB61903.2| 3434|Homo sapiens KIAA1773 protein protein.     30   7.9  

>BC108266-1|AAI08267.1|  320|Homo sapiens heterogeneous nuclear
           ribonucleoprotein A1-like protein.
          Length = 320

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = -1

Query: 681 ISRDPSVERSGGIGRLDESTEELVSEALNTT 589
           + RDP+ +RS G G +  +T E V  A+NTT
Sbjct: 45  VMRDPNTKRSRGFGFVTYATVEEVDAAMNTT 75


>AL137058-3|CAI16736.1|  320|Homo sapiens protein ( Human DNA
           sequence from clone RP11-78J21 on chromosome
           13q32.2-33.3 Contains 2 novel genes, a pseudogene
           similar to part of TPTE and  ).
          Length = 320

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = -1

Query: 681 ISRDPSVERSGGIGRLDESTEELVSEALNTT 589
           + RDP+ +RS G G +  +T E V  A+NTT
Sbjct: 45  VMRDPNTKRSRGFGFVTYATVEEVDAAMNTT 75


>AB053446-1|BAB61903.2| 3434|Homo sapiens KIAA1773 protein protein.
          Length = 3434

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 16/39 (41%), Positives = 24/39 (61%)
 Frame = -2

Query: 413  LNRNNQSNRQIYVRISDGGSPCQLTIRSTTRKCQLAITE 297
            L+R  QS+ Q+ V++ DGGSP     RSTT    +A+ +
Sbjct: 1305 LDREQQSSYQLLVQVQDGGSP----PRSTTGTVHVAVLD 1339


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,055,064
Number of Sequences: 237096
Number of extensions: 2191949
Number of successful extensions: 4016
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3929
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4016
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9183116696
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)