Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0964
(759 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 23 2.4
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 23 2.4
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 23 2.4
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 23 2.4
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 23 2.4
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 23 2.4
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 3.1
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 3.1
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 23 4.1
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 22 5.4
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 22 5.4
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 22 5.4
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 22 5.4
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 22 5.4
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 22 5.4
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 22 5.4
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 22 5.4
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 22 5.4
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 22 5.4
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 22 7.2
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 22 7.2
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 22 7.2
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 22 7.2
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 9.5
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.4 bits (48), Expect = 2.4
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -2
Query: 452 PVIGHIVSSNYNPLNRNNQSNRQIYVRIS 366
P I +S+NYN N NN + +Q+ I+
Sbjct: 79 PKIISSLSNNYNYSNYNNNNYKQLCYNIN 107
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.4 bits (48), Expect = 2.4
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -2
Query: 452 PVIGHIVSSNYNPLNRNNQSNRQIYVRIS 366
P I +S+NYN N NN + +Q+ I+
Sbjct: 79 PKIISSLSNNYNYSNYNNNNYKQLCYNIN 107
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.4 bits (48), Expect = 2.4
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -2
Query: 452 PVIGHIVSSNYNPLNRNNQSNRQIYVRIS 366
P I +S+NYN N NN + +Q+ I+
Sbjct: 79 PKIISSLSNNYNYSNYNNNNYKQLCYNIN 107
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.4 bits (48), Expect = 2.4
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -2
Query: 452 PVIGHIVSSNYNPLNRNNQSNRQIYVRIS 366
P I +S+NYN N NN + +Q+ I+
Sbjct: 79 PKIISSLSNNYNYSNYNNNNYKQLCYNIN 107
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.4 bits (48), Expect = 2.4
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -2
Query: 452 PVIGHIVSSNYNPLNRNNQSNRQIYVRIS 366
P I +S+NYN N NN + +Q+ I+
Sbjct: 79 PKIISSLSNNYNYSNYNNNNYKQLCYNIN 107
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.4 bits (48), Expect = 2.4
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -2
Query: 452 PVIGHIVSSNYNPLNRNNQSNRQIYVRIS 366
P I +S+NYN N NN + +Q+ I+
Sbjct: 79 PKIISSLSNNYNYSNYNNNNYKQLCYNIN 107
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 23.0 bits (47), Expect = 3.1
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = -1
Query: 660 ERSGGIGRLDEST-EELVSEALNTTLKPAVRYHLRTV 553
E GI + E T L AL LKPA RY +R +
Sbjct: 947 EGDAGIWQQQEFTGPPLPYAALIDELKPATRYTIRVI 983
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 23.0 bits (47), Expect = 3.1
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = -1
Query: 660 ERSGGIGRLDEST-EELVSEALNTTLKPAVRYHLRTV 553
E GI + E T L AL LKPA RY +R +
Sbjct: 943 EGDAGIWQQQEFTGPPLPYAALIDELKPATRYTIRVI 979
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 22.6 bits (46), Expect = 4.1
Identities = 9/22 (40%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Frame = -2
Query: 431 SSNYNPLNRNNQSN-RQIYVRI 369
++NYN N NN +N +++Y I
Sbjct: 335 NNNYNNYNNNNYNNYKKLYYNI 356
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 5.4
Identities = 10/23 (43%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
Frame = -2
Query: 428 SNYNPLNRNNQSN--RQIYVRIS 366
SNYN N NN N +++Y I+
Sbjct: 92 SNYNNYNNNNNYNNYKKLYYNIN 114
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 22.2 bits (45), Expect = 5.4
Identities = 10/23 (43%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
Frame = -2
Query: 428 SNYNPLNRNNQSN--RQIYVRIS 366
SNYN N NN N +++Y I+
Sbjct: 92 SNYNNYNNNNNYNNYKKLYYNIN 114
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 5.4
Identities = 10/23 (43%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
Frame = -2
Query: 428 SNYNPLNRNNQSN--RQIYVRIS 366
SNYN N NN N +++Y I+
Sbjct: 92 SNYNNYNNNNNYNNYKKLYYNIN 114
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 5.4
Identities = 10/23 (43%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
Frame = -2
Query: 428 SNYNPLNRNNQSN--RQIYVRIS 366
SNYN N NN N +++Y I+
Sbjct: 92 SNYNNYNNNNNYNNYKKLYYNIN 114
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 5.4
Identities = 10/23 (43%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
Frame = -2
Query: 428 SNYNPLNRNNQSN--RQIYVRIS 366
SNYN N NN N +++Y I+
Sbjct: 92 SNYNNYNNNNNYNNYKKLYYNIN 114
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 5.4
Identities = 10/23 (43%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
Frame = -2
Query: 428 SNYNPLNRNNQSN--RQIYVRIS 366
SNYN N NN N +++Y I+
Sbjct: 92 SNYNNYNNNNNYNNYKKLYYNIN 114
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 5.4
Identities = 10/23 (43%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
Frame = -2
Query: 428 SNYNPLNRNNQSN--RQIYVRIS 366
SNYN N NN N +++Y I+
Sbjct: 92 SNYNNYNNNNNYNNYKKLYYNIN 114
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 5.4
Identities = 10/23 (43%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
Frame = -2
Query: 428 SNYNPLNRNNQSN--RQIYVRIS 366
SNYN N NN N +++Y I+
Sbjct: 92 SNYNNYNNNNNYNNYKKLYYNIN 114
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.2 bits (45), Expect = 5.4
Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = -2
Query: 437 IVSSNYNPLNRNNQSN-RQIYVRI 369
I S+NYN N NN N +++Y I
Sbjct: 304 ISSNNYNYKNYNNNYNSKKLYYNI 327
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 5.4
Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = -2
Query: 437 IVSSNYNPLNRNNQSN-RQIYVRI 369
I S+NYN N NN N +++Y I
Sbjct: 315 ISSNNYNYKNYNNNYNSKKLYYNI 338
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 7.2
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -2
Query: 428 SNYNPLNRNNQSN 390
SNYN N NN +N
Sbjct: 92 SNYNNYNNNNYNN 104
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 7.2
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -2
Query: 428 SNYNPLNRNNQSN 390
SNYN N NN +N
Sbjct: 92 SNYNNYNNNNYNN 104
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 7.2
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -2
Query: 428 SNYNPLNRNNQSN 390
SNYN N NN +N
Sbjct: 92 SNYNNYNNNNYNN 104
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 7.2
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -2
Query: 428 SNYNPLNRNNQSN 390
SNYN N NN +N
Sbjct: 92 SNYNNYNNNNYNN 104
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.4 bits (43), Expect = 9.5
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -1
Query: 588 LKPAVRYHLRTV 553
L+PA YHLR V
Sbjct: 942 LRPATTYHLRIV 953
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,890
Number of Sequences: 438
Number of extensions: 4360
Number of successful extensions: 28
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23875740
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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