Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0963
         (784 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    22   6.4  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   6.4  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      21   8.4  

>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = +2

Query: 227 KSMQALTLNFLNDNLRKKVENILPRLFD-NITD 322
           K++QA   +  N NL+  ++NIL   F   ITD
Sbjct: 114 KTLQANNNDASNGNLKFSIDNILKADFGRRITD 146


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +3

Query: 549 TIQCKIFLNILI-FL*NPCILKQISIMIIRKT*LPV*LLPFCIAPLCL 689
           T +C     +LI  L   CILK I  ++++   L   +  FC AP+ +
Sbjct: 52  TKKCYFLRMVLIDLLIVGCILKHIFNILMKNVTLNDVVFIFCSAPIII 99


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 11/44 (25%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
 Frame = +2

Query: 206 NEWNGFVKSMQALTLNFLNDNLRKKVENIL---PRLFDNITDYF 328
           N++ GFV    A   +  + N+ KK+ N     P   +N+ +++
Sbjct: 326 NDFEGFVHPTVAKRGSITSKNVAKKIRNFYYGGPNSENNLDNFY 369


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,996
Number of Sequences: 336
Number of extensions: 3787
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21168876
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)