Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0959
         (380 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    22   2.4  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           20   7.3  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    20   7.3  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    20   9.6  

>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 9/20 (45%), Positives = 12/20 (60%), Gaps = 1/20 (5%)
 Frame = +3

Query: 96  LYKMVQRTFPP-HHRGTLKW 152
           LYK +++ FPP    G L W
Sbjct: 286 LYKKIKKAFPPLSLHGQLLW 305


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 20.2 bits (40), Expect = 7.3
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +1

Query: 256 PRRRSRPFPHEHPSQGQRPQ 315
           PR R R   H+  ++ +RP+
Sbjct: 314 PRERPRATDHQRRNEPKRPR 333


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 20.2 bits (40), Expect = 7.3
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +3

Query: 96  LYKMVQRTFPPHHRGTLKWWS 158
           L + + R    H  GTLK WS
Sbjct: 79  LEQFIVRFMKYHFFGTLKLWS 99



 Score = 20.2 bits (40), Expect = 7.3
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 66  NIFVVCLTCIYV 31
           +IF VC T IY+
Sbjct: 163 HIFTVCRTLIYI 174


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +1

Query: 49  TNNENVLPRPKTCRPCCTKW 108
           + N +  P  +TCR  C K+
Sbjct: 49  SRNTDTYPTLETCRLVCGKY 68


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,721
Number of Sequences: 336
Number of extensions: 2256
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  7908675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)